Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., ABC-type cobalamin transport system, permease component from Enterobacter asburiae PDN3

 Score =  132 bits (333), Expect = 2e-35
 Identities = 93/307 (30%), Positives = 153/307 (49%), Gaps = 9/307 (2%)

Query: 347 VMLIAAALLLALSLHIGWQMESASWALPSE-FQWPLRWPRMLTALFAGVGLAIAGTLLQR 405
           VML+  A   +L     W    + W    + F W +R PR +  +  G  LA+ GT++Q 
Sbjct: 20  VMLLIVAAGASLCAGDRWIGPESWWGPDGQLFVWQIRLPRTVAVVLVGAALALCGTIMQA 79

Query: 406 LIYNPLASPDILGVSSGATFALVFASLFLGQSLQSTHW---MTALLGSAAVLVALLLLGR 462
           L  NPLA P +LGVS+GA   L+ A +  G  L    W   ++A+LG A ++ A+LL   
Sbjct: 80  LFDNPLAEPGLLGVSNGAGVGLIAAVMLGGGELSG--WSISLSAILG-ALLITAILLRFA 136

Query: 463 RHHYAPSSLILTGIAITALLEALVQFTLAKGTG-DSYQILLWLSGSTYRATGEQALLLSV 521
           R H + S L+L G+A+  +  AL+ + +   T  D  Q++ W+ G        Q  L+++
Sbjct: 137 RRHLSTSRLLLAGVALGIICSALMTWAVYFSTSFDLRQLMYWMMGGFGGVDWHQGWLMAL 196

Query: 522 GVVGLTLLALGLSRWLTLISIGRGFASARGLSASRASLVLLILVALLCALVTATMGPVSF 581
            V  +   AL  ++ L ++++G   A   G+       VL+I +  L  +  A  G + F
Sbjct: 197 LVPVIVWAAL-QAQPLNMLALGETSARQLGMPIGFWRNVLVIAIGWLVGVSVALAGAIGF 255

Query: 582 VGLIAPHMAMMLGAQRAPSQLLLAALVGGTLMLWADWLGQALLFPAQIAAGTLVAIIGGS 641
           +GL+ PHM  + G     + L  +A+ G   +L AD + +  L  A++  G + A +G  
Sbjct: 256 IGLVIPHMLRLCGLTDHRTLLPASAVAGAVTLLVADIIARLALTAAELPIGVVTATLGAP 315

Query: 642 YFLLLLL 648
            F+ LLL
Sbjct: 316 VFIWLLL 322



 Score =  127 bits (320), Expect = 6e-34
 Identities = 100/316 (31%), Positives = 167/316 (52%), Gaps = 20/316 (6%)

Query: 12  LTLLLALVSLQWGHNLTLNEQWQLVLGHQAAQSFAQVNFIYA-QLPRAVMAIVVGAVLGL 70
           L LL+ L+ +  G +L   ++W   +G ++        F++  +LPR V  ++VGA L L
Sbjct: 16  LFLLVMLLIVAAGASLCAGDRW---IGPESWWGPDGQLFVWQIRLPRTVAVVLVGAALAL 72

Query: 71  VGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWVADYS-ALAAMAGALLAFALI 129
            G++MQ L  N L  P  LG S+GA +GLI   +     ++ +S +L+A+ GALL  A++
Sbjct: 73  CGTIMQALFDNPLAEPGLLGVSNGAGVGLIAAVMLGGGELSGWSISLSAILGALLITAIL 132

Query: 130 ISIAGLRNLTGLPLVVSGMVVNILLGSIATALVLLNEEF-AQNVFMWGAGDLAQNGWE-- 186
           +  A  R+L+   L+++G+ + I+  ++ T  V  +  F  + +  W  G      W   
Sbjct: 133 LRFA-RRHLSTSRLLLAGVALGIICSALMTWAVYFSTSFDLRQLMYWMMGGFGGVDWHQG 191

Query: 187 WLTWLLPRLALVFPLLLFA---PRVLTLLRLGHEGAAARGLAVLPAFLFLMAGGIWLVSA 243
           WL      +AL+ P++++A    + L +L LG   A   G+ +      L+    WLV  
Sbjct: 192 WL------MALLVPVIVWAALQAQPLNMLALGETSARQLGMPIGFWRNVLVIAIGWLVGV 245

Query: 244 SITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLATDMLAMGLSVWAEEVV 303
           S+   G IGFIGL+ P++ R  G    +  L +SA+ GA+ LL  D++A  L++ A E +
Sbjct: 246 SVALAGAIGFIGLVIPHMLRLCGLTDHRTLLPASAVAGAVTLLVADIIAR-LALTAAE-L 303

Query: 304 PSGITAAVIGAPALIW 319
           P G+  A +GAP  IW
Sbjct: 304 PIGVVTATLGAPVFIW 319