Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  598 bits (1543), Expect = e-175
 Identities = 305/607 (50%), Positives = 410/607 (67%)

Query: 3   MFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYM 62
           +++ FE+L + F       PP  ++ F  YY +        + ++    A+ EV L  Y+
Sbjct: 2   LYRRFEQLIDIFRDAPSAAPPDKVLPFYLYYLRQVWPHFAALLVVGLIGALIEVALFSYL 61

Query: 63  GEIVDILSTQERHQFWEMHGERLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSIRWS 122
             I+D+        F+++H   L  MA + L++ PI   +H +L+HQTI       IRW 
Sbjct: 62  SRIIDLAQGTPPADFFQVHSTELIWMAVVALLLRPIFGALHDLLVHQTISPGMTSLIRWQ 121

Query: 123 THRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEA 182
            H Y+LKQS+ FFQ DFAGR+A ++MQ  NS+R++ +  VD   ++A+Y +S LV+ AEA
Sbjct: 122 NHSYVLKQSLNFFQNDFAGRIAQRIMQTGNSLRDSAVAAVDAIWHVAIYAISSLVLFAEA 181

Query: 183 DKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHS 242
           D  L++P++ W++ Y     YFVPR+K  S   + A+S++ GRIVD YTNITT+KLF+H+
Sbjct: 182 DWRLMIPLVTWIICYGLALRYFVPRVKERSVISSEARSKLMGRIVDGYTNITTLKLFAHT 241

Query: 243 QRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVGV 302
           + E  YAK  + +         R +TS+   +  +N LL+ +   L++ LW    ++VG 
Sbjct: 242 RYEQEYAKEAIIEQTEKTQLASRVVTSMDIVITTMNGLLIVTTTGLALWLWTQSLISVGA 301

Query: 303 IAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFGE 362
           IA+   + +R+  MS WIMW +  +FE++G V D + TIA P+ + DR  A  L V  GE
Sbjct: 302 IALATGLVIRIVNMSGWIMWVVNGIFENIGQVQDGLKTIAQPLAVIDRDNAPRLSVPHGE 361

Query: 363 LSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIRI 422
           + F QV F Y  +  +   LNL I+AGEK+G++G SGAGKSTLVNLLLR YD+Q G+I I
Sbjct: 362 VRFEQVDFHYGKKSGIIGGLNLEIKAGEKIGLIGPSGAGKSTLVNLLLRLYDLQGGRILI 421

Query: 423 DGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDFI 482
           DGQ+I+ V+QESLR  IGMITQDTSLLHRSIRDN+LYG PDA    +  A  +A A +FI
Sbjct: 422 DGQNIADVAQESLREQIGMITQDTSLLHRSIRDNLLYGKPDATDEELWAAVHKARADEFI 481

Query: 483 QELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVESA 542
             L D +GRTG D  VGERGVKLSGGQRQRIAIARVLLK+APILIMDEATSALDSEVE+A
Sbjct: 482 PLLSDSEGRTGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSALDSEVEAA 541

Query: 543 IQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWAH 602
           IQE+L TLM GKTVIAIAHRLSTIA MDRL+V+++G+I E G+H ELLAH G+YA+LW H
Sbjct: 542 IQESLETLMQGKTVIAIAHRLSTIARMDRLVVLEKGQIAESGSHAELLAHGGLYARLWQH 601

Query: 603 QTGGFIG 609
           QTGGF+G
Sbjct: 602 QTGGFVG 608