Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  256 bits (655), Expect = 1e-72
 Identities = 163/512 (31%), Positives = 278/512 (54%), Gaps = 39/512 (7%)

Query: 119 IRWSTHRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVM 178
           IR     +L+    GF++ + +  + +++  +   ++  +   + L +  A+ ++  +V+
Sbjct: 97  IRRQVFNHLIYLHPGFYENNRSSEIQSRLTTDTTLLQSVIGSSLSLFLRNALMVIGGIVL 156

Query: 179 IAEADKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKL 238
           +   +  L   ++V L   +A  + F  R++++S    +  + +   + +T   I TV+ 
Sbjct: 157 LFVTNPKLTSIVVVALPLVLAPILIFGRRVRSLSRQSQDRIADVGSYVSETLGQIKTVQA 216

Query: 239 FSHSQRETTYAKSGMKQFLHTVYRQMRTLTS-LLYSVDLINYLLLFSIAALSIQLWLAET 297
           ++H  ++        ++F  TV     T    +     LI  +++  + A+ + LW+   
Sbjct: 217 YNHQVQDE-------QRFAVTVEEAFTTARKRIAQRAWLITLVIMLVLGAVGVMLWVGGM 269

Query: 298 ------VTVGVIAIGITIALRMQ---GMSKWIMWEIR---ALFESVGTVIDSMNTIANP- 344
                 ++ G +A  +  +L +    G    ++ E++      E +G ++ S N I  P 
Sbjct: 270 DVINGRISGGELAAFVFYSLIVGSAVGTLSEVLGELQRAAGAAERIGELLQSSNEIQAPA 329

Query: 345 ---VEIEDRPQAKSLQVKFGELSFSQVRFGYSAQKTVF--DDLNLVIQAGEKVGIVGRSG 399
              V++ +R          G ++   +RF Y ++   +  D LNL I  GE + +VG SG
Sbjct: 330 TGTVQLPERVS--------GRMALQDLRFSYPSRPDSYAIDGLNLTINPGETLALVGPSG 381

Query: 400 AGKSTLVNLLLRFYDVQSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILY 459
           AGKST+ +LLLRFYD Q G+I ++G  ++ +    LRRH  +++Q  +L   S+ +NI Y
Sbjct: 382 AGKSTIFDLLLRFYDPQQGRILLEGHPLTELDPMDLRRHFALVSQSPALFFGSVEENIRY 441

Query: 460 GNPDADQAAIEEAARQAHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVL 519
           GNP A    +E AAR AHAHDFI ++ D     GY   +G+ G+ LSGGQRQR+AIAR L
Sbjct: 442 GNPTATTEQVEAAARIAHAHDFILQMPD-----GYQTHLGDGGMGLSGGQRQRLAIARAL 496

Query: 520 LKNAPILIMDEATSALDSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGK 579
           L +APIL++DEATSALD++ E  IQ+ L  LM G+T + IAHRL+T+   DR+ VMD+GK
Sbjct: 497 LVDAPILLLDEATSALDAQSEHLIQQALPQLMQGRTTLVIAHRLATVKNADRIAVMDQGK 556

Query: 580 IVEQGTHQELLAHKGIYAQLWAHQTGGFIGEA 611
           +V  GTHQ+L+A   +YA+L A Q    + E+
Sbjct: 557 LVAVGTHQQLIASNPLYARLAALQFSDGVEES 588