Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., Efflux ABC transporter, permease/ATP-binding protein Atu2242 from Variovorax sp. SCN45

 Score =  652 bits (1682), Expect = 0.0
 Identities = 325/609 (53%), Positives = 440/609 (72%), Gaps = 2/609 (0%)

Query: 3   MFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYM 62
           +F++FEKL  P+PA EP  PP+   AF    T G    +  M++L+A +++ E  L   +
Sbjct: 1   LFRFFEKLLHPYPAAEPSLPPQGFFAFLWACTHGVRGKIAAMAVLTAVMSIFEAALFAIL 60

Query: 63  GEIVDILSTQERHQFWEMHGERLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSIRWS 122
           G IVD L  Q   + WE  G  L  +AA +++ + ++AL  +++ HQT+  N PM +RW+
Sbjct: 61  GRIVDWLGGQVPSRLWEDRGTTLMWLAAFLVISIGVVAL-QTIVKHQTLAVNLPMRLRWN 119

Query: 123 THRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEA 182
            HR +L QS+ F+Q +FAGR+  KVMQ A +VRET+  L D+ V + VY+ +M++++   
Sbjct: 120 FHRLMLGQSMAFYQDEFAGRITAKVMQTALAVRETIFVLADVLVAMGVYVATMIILVGVL 179

Query: 183 DKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHS 242
           D  LV P L+WL+ Y+   +YFVPRL  +   QA+A++ MTGR+ D YTNI TVKLFSH+
Sbjct: 180 DAQLVWPFLIWLVLYVVSLIYFVPRLGKVGKAQADARALMTGRVTDAYTNIATVKLFSHT 239

Query: 243 QRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVGV 302
           QRE  +A+  M++F+HT Y QMR +++       ++  L   +A +++ LW    V VG 
Sbjct: 240 QREAGFARDAMREFMHTGYGQMRLVSAFEIVNHTLSMGLTAGMAGMALWLWSNGAVGVGA 299

Query: 303 IAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFGE 362
           +A    +ALR+QGMS WIMWE+ +LFE++GTV D M T++ P  + D   A  LQV  GE
Sbjct: 300 VAAATAMALRLQGMSHWIMWEMTSLFENIGTVQDGMKTLSRPRTVLDAADATVLQVPQGE 359

Query: 363 LSFSQVRFGYS-AQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIR 421
           + F    F Y    + V DDLNL ++ GEK+G+VGRSGAGKSTLVNLLLRF+D++SG+I 
Sbjct: 360 VRFEHASFRYGDGGRRVIDDLNLTVKPGEKIGLVGRSGAGKSTLVNLLLRFHDLESGRIL 419

Query: 422 IDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDF 481
           IDGQDI+HV+Q+SLR HIGM+TQDTSL+HRS+ DN+ YG PDA +  IE AAR+A AHDF
Sbjct: 420 IDGQDIAHVTQDSLRSHIGMVTQDTSLMHRSVADNVAYGRPDATREQIEAAARRAEAHDF 479

Query: 482 IQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVES 541
           IQ L D  GR GY+  VGERGVKLSGGQRQR+AIARV+LK+APIL++DEATSALDSEVE+
Sbjct: 480 IQTLGDAGGRRGYEAHVGERGVKLSGGQRQRVAIARVMLKDAPILLLDEATSALDSEVEA 539

Query: 542 AIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWA 601
           AIQ++L+TLM GKTVIAIAHRLSTIAAMDRLIV+DEG++VE+G H+ L+A  G+YA+LWA
Sbjct: 540 AIQQSLYTLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRVVEEGDHRTLMAQGGLYARLWA 599

Query: 602 HQTGGFIGE 610
           HQ+GGF+GE
Sbjct: 600 HQSGGFLGE 608