Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., Efflux ABC transporter, permease/ATP-binding protein from Variovorax sp. SCN45

 Score =  251 bits (641), Expect = 6e-71
 Identities = 160/489 (32%), Positives = 250/489 (51%), Gaps = 9/489 (1%)

Query: 119 IRWSTHRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVM 178
           IR + +  +LKQS  FF+    G V +++  +   V+  V   + + +  AV  V  L +
Sbjct: 100 IRNAVYGRVLKQSPAFFETTQTGEVLSRLTADTTLVQTVVGSSLSMGLRNAVMGVGALAV 159

Query: 179 IAEADKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKL 238
           +   +  ++V +L  L+  +   ++F  R++ +S    +  +  +    +    I  V+ 
Sbjct: 160 LVWTNPYVMVQVLGILVLVVLPSMWFGRRVRKLSRASQDRVADSSAIAAEVLNAIPVVQS 219

Query: 239 FSHSQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETV 298
           ++   RE +      +    T  R+ +  + L+  + +     L        Q  L   +
Sbjct: 220 YTAEGREASRFNGSTENAFRTAVRRTKARSVLVAFIIIATSAALLWGLYQGTQAVLRGDI 279

Query: 299 TVGVIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIED--RPQAKSL 356
           T G +   +     +   +  +      L  + G     M  +  P  I     P    +
Sbjct: 280 TAGHLGQTVVYVAILASATAVLGEVYGDLLRAAGATERLMELLHAPSAIFSPANPAVTPV 339

Query: 357 QVKFGELSFSQVRFGYSAQK--TVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYD 414
                 + F  V F Y ++       D +L +  GE V +VG SGAGKST+  LLLR+YD
Sbjct: 340 PAAGSAIRFDAVTFHYPSRPGTPALRDFSLDVAPGETVALVGSSGAGKSTVFQLLLRYYD 399

Query: 415 VQSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAAR 474
            QSG++ +DG  ++ ++   LR  IG++ QD  +   S  +NI YG P+A    +  AAR
Sbjct: 400 PQSGRLILDGAPLASLALSDLRTRIGLVPQDAVIFSTSAFENIRYGRPEATAEEVHAAAR 459

Query: 475 QAHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSA 534
            A AHDF+Q L +     GYD  +GERGV+LSGGQRQRIAIAR +LKN P+L++DEATSA
Sbjct: 460 AAFAHDFLQALPE-----GYDTFLGERGVRLSGGQRQRIAIARAILKNPPLLLLDEATSA 514

Query: 535 LDSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKG 594
           LD+E E  +Q  L + M G+T + IAHRL+T+   DR+IV+D G IVEQGTH  L+A  G
Sbjct: 515 LDAESERMVQAALESAMEGRTTLVIAHRLATVQKADRIIVLDHGGIVEQGTHAALVAQGG 574

Query: 595 IYAQLWAHQ 603
           +YA+L A Q
Sbjct: 575 VYARLAALQ 583