Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 747 a.a., RTX toxin transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  240 bits (612), Expect = 2e-67
 Identities = 169/491 (34%), Positives = 259/491 (52%), Gaps = 23/491 (4%)

Query: 125 RYLLKQSIGFFQRDFAGRVATKV--MQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEA 182
           R+L++  + +FQ    G    +V  ++N  S        V L V  ++  V++++  +  
Sbjct: 256 RHLVQLPLAYFQARRVGDSVARVRELENIRSFLTGNALTVLLDVVFSIVFVAVMLFYSVP 315

Query: 183 DKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHS 242
              L + +L  +  Y  + +  VP L++   ++    ++    +V+T + I TVK    +
Sbjct: 316 ---LTLIVLASMPLYFGLSLAVVPILRSRLDEKFARGAENQAMLVETVSAIQTVKA---T 369

Query: 243 QRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWL-AETVTVG 301
             E  + +    Q    +    RT     ++ + +N +     AA    LW  A  V   
Sbjct: 370 ALEPAFGRRWDNQLAAYISASFRTQNLASWANEGVNLIGKLVNAAT---LWYGAHLVMNN 426

Query: 302 VIAIGITIALRM--QGMSKWIMW--EIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQ 357
            + +G  +A  M  Q +S+ IM   ++   F+  G  +  +  I N         A  L 
Sbjct: 427 DLTVGQFVAFNMFAQRVSQPIMRMAQLWTDFQQTGISMARLGDILNTRTEVPPSTAAQLP 486

Query: 358 VKFGELSFSQVRFGYSAQKT-VFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQ 416
              G ++   + F Y  +   V + ++L ++ GE +GIVGRSG+GKSTL  L+ R Y  +
Sbjct: 487 ALKGRVTLDNLTFRYRPEAAPVLNGVSLDVRPGEVIGIVGRSGSGKSTLTKLIQRLYAPE 546

Query: 417 SGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQA 476
            G++ +DG DIS +    LR  +G++ Q+ +L +RS+R+NI   +P A   AI  AA+ A
Sbjct: 547 QGRLLVDGIDISLIDAAQLRMQVGVVLQENTLFNRSVRENIAIVDPAAPLEAIIHAAQLA 606

Query: 477 HAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALD 536
            AH+FI EL +     GYD  VGE+G  LSGGQRQRIAIAR L  +  +LI DEATSALD
Sbjct: 607 GAHEFISELPE-----GYDTMVGEQGASLSGGQRQRIAIARALFTHPRVLIFDEATSALD 661

Query: 537 SEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAH-KGI 595
            E E+ +Q N+  +  G+TV  IAHRLS +   +R+IVMD+GKIVE GTH+ LLA  KGI
Sbjct: 662 YESEAIVQRNMAHICRGRTVFIIAHRLSAVRHANRIIVMDKGKIVEGGTHESLLARPKGI 721

Query: 596 YAQLWAHQTGG 606
           YA LW  Q GG
Sbjct: 722 YAHLWNMQGGG 732