Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., putative ABC transporter, ATP-binding protein/permease protein from Pseudomonas putida KT2440

 Score =  606 bits (1563), Expect = e-178
 Identities = 307/608 (50%), Positives = 417/608 (68%), Gaps = 2/608 (0%)

Query: 3   MFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYM 62
           +++ FE+L + F     + PP ++  F  YY +      + + ++    ++ EV +  Y+
Sbjct: 2   LYRRFERLIDIFREAPSEAPPSTVWPFYLYYLRQVWPSFVALLVVGLVASLIEVAMFSYL 61

Query: 63  GEIVDILSTQERHQFWEMH-GERLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSIRW 121
             I+D+        F+  H GE +W M  ++L++ P+   +H +L+HQTI       IRW
Sbjct: 62  SRIIDLAQGTPNANFFSEHSGELIW-MLVVILLLRPLFFGLHDLLVHQTINPGMTSLIRW 120

Query: 122 STHRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAE 181
             H Y+LKQS+ FFQ DFAGR+A ++MQ  NS+R++ ++ VD   ++ +Y ++ LV+ AE
Sbjct: 121 QNHTYVLKQSLNFFQSDFAGRIAQRIMQTGNSLRDSAVQAVDALWHVLIYAITSLVLFAE 180

Query: 182 ADKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSH 241
           AD  L++P+L W++ YIA   YFVPR+K  S   ++A+S++ GRIVD YTNI T+KLF+H
Sbjct: 181 ADWRLMLPLLAWIVSYIAALFYFVPRVKERSVVSSDARSKLMGRIVDGYTNIATLKLFAH 240

Query: 242 SQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVG 301
           +  E  YA+  +++         R +TS+   +  +N LL+ +   L++ LW    +TVG
Sbjct: 241 TDYEQQYAREAIREQTEKTQLASRVITSMDVVITTLNGLLVVATTGLALWLWSQSLITVG 300

Query: 302 VIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFG 361
            IA+   + +R+  MS WIMW +  +FE++G V D + TIA PV + D P A +L+V  G
Sbjct: 301 AIALATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLQTIAQPVTVTDPPNAPALKVSRG 360

Query: 362 ELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIR 421
            + F  V F Y     V + LNL I+ GEK+G++G SGAGKSTLVNLLLR YDVQ G+I 
Sbjct: 361 AVRFVDVDFHYGKATNVIEGLNLDIRPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGGRIL 420

Query: 422 IDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDF 481
           IDGQDI+ VSQ SLR  IGMITQDTSLLHRSIR+N+LYG P A  A + EA R+A A +F
Sbjct: 421 IDGQDIAKVSQASLRAQIGMITQDTSLLHRSIRENLLYGRPGASDAELHEAVRRARADEF 480

Query: 482 IQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVES 541
           I +L D QGRTG+D  VGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVE+
Sbjct: 481 IPQLSDAQGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVEA 540

Query: 542 AIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWA 601
           AIQE+L TLM GKTVIAIAHRLSTIA MDRL+V+D+G+IVE G+H ELL  +G+YA+LW 
Sbjct: 541 AIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGRIVESGSHSELLEQQGLYARLWH 600

Query: 602 HQTGGFIG 609
           HQTGGF+G
Sbjct: 601 HQTGGFVG 608