Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., Lipid A export ATP-binding/permease protein MsbA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  257 bits (656), Expect = 1e-72
 Identities = 176/466 (37%), Positives = 242/466 (51%), Gaps = 29/466 (6%)

Query: 158 VLKLVDLSVY------IAVYMVSMLVMIAEADKILVVPILVWLLFYIAIQVYFVPRLKTI 211
           V  L+  S+Y      I V MV + ++  + D   V   LV L+ Y+   V         
Sbjct: 160 VQSLISYSLYSIFPTLIEVIMV-LTLLGTQFDMGYVWITLVALVLYVTFTVLVTEWRTQF 218

Query: 212 STDQANAQSQMTGRIVDTYTNITTVKLFSHSQRETTYAKSGMKQFLHTVYRQMRTLT--- 268
                  +S    R +D+  N  TVK F++   E       +++      +   TL+   
Sbjct: 219 RRKMNELESTSQSRAIDSLLNYETVKYFNNEGFEGRRYDEALEKLRRARIKSQTTLSMLN 278

Query: 269 ---SLLYSVDLINYLLLFSIAALSIQLWLAETVTVGVIAIGITIALRMQGMSKWIMWEIR 325
               L+ +V L+  L   +   +S QL L + V V    I + I L   G+        R
Sbjct: 279 AGQQLVIAVALVLMLWRATQGVVSGQLTLGDLVMVNAFMIQLYIPLGFLGVL------YR 332

Query: 326 ALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFGE-LSFSQVRFGYSAQKTVFDDLNL 384
            + +S+  +      +    EI D P A+ LQ+     + F  VRF Y   + +   ++ 
Sbjct: 333 EIKQSLTDLEKMFALLEKEREIADVPGAQPLQLAGPPAVRFENVRFSYEPAREILHGISF 392

Query: 385 VIQAGEKVGIVGRSGAGKSTLVNLLLRFYDV----QSGQIRIDGQDISHVSQESLRRHIG 440
            I  G+ V +VG SG+GKSTL  LL RFYDV    + G+I IDGQDI  V+Q S+R+ IG
Sbjct: 393 DIPPGKTVAVVGPSGSGKSTLARLLYRFYDVSNAAEGGRILIDGQDIKAVTQASVRQAIG 452

Query: 441 MITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDFIQELQDEQGRTGYDVQVGE 500
           ++ QDT L + +I  NILYG PDA   A   AA+ AH H FIQ L       GY   VGE
Sbjct: 453 IVPQDTVLFNDTIEYNILYGRPDAGHEAAVRAAQAAHIHPFIQHLP-----LGYATMVGE 507

Query: 501 RGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVESAIQENLHTLMAGKTVIAIA 560
           RG+KLSGG++QR+AIAR LLKN PI+I DEATSALDS  E AIQ  L +    KT + IA
Sbjct: 508 RGLKLSGGEKQRVAIARTLLKNPPIVIFDEATSALDSANERAIQAELRSAARNKTTLVIA 567

Query: 561 HRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWAHQTGG 606
           HRLST+     ++V+  G IVE+GTH EL+A  G+YA +WA Q  G
Sbjct: 568 HRLSTVVDAHEILVLVNGDIVERGTHAELVARAGVYAGMWALQQSG 613