Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., Putative multidrug export ATP-binding/permease protein from Methylophilus sp. DMC18

 Score =  634 bits (1634), Expect = 0.0
 Identities = 320/610 (52%), Positives = 429/610 (70%), Gaps = 1/610 (0%)

Query: 1   MFMFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVR 60
           M +F  FE L  PFPA+     P     F    + G  + +L+M+LL+AC+   E  L  
Sbjct: 1   MRLFSRFEALVSPFPAEILTRLPTRFWPFMWACSYGMRRYILIMTLLTACIGSFEALLFA 60

Query: 61  YMGEIVDILSTQERHQFWEMHGERLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSIR 120
            MG++VD L+  +  Q W  H   LW +AA VLV   ++ L  ++L HQT+ GN+PM +R
Sbjct: 61  LMGKVVDKLTAIQPAQLWTTHQSTLWLVAA-VLVGSTVVILFQTLLKHQTLAGNFPMRLR 119

Query: 121 WSTHRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIA 180
           W  H+++L QS+GF+Q +FAGRV+ KVMQ A +VRE    L D+ VY+ +Y  +++ ++ 
Sbjct: 120 WQFHQHMLNQSMGFYQDEFAGRVSAKVMQTALAVREVWFILADIMVYVLLYFTTIVTVVG 179

Query: 181 EADKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFS 240
                +V+P L WL  Y    VYF+PRL  +S  QA+A+S MTGRI D YTNI+TVKLFS
Sbjct: 180 SFHPWMVLPFLGWLSLYACALVYFIPRLAKVSQHQADARSLMTGRITDAYTNISTVKLFS 239

Query: 241 HSQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTV 300
           H+ RE +YA+S M++FL TV+ QMR ++ +      +N  L+ +  ++ + LW    V  
Sbjct: 240 HAGREASYAQSAMQEFLDTVHGQMRMVSCVESINHFLNMCLIIASGSMVLWLWSQGLVAA 299

Query: 301 GVIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKF 360
           G +A  + ++LR+ G+S W+MWE+ +L+E +GTV D MNT++    + D+P A +L V  
Sbjct: 300 GAVAAVLAMSLRLNGISHWVMWELTSLYEQIGTVQDGMNTLSIENRVLDQPDAVALNVPK 359

Query: 361 GELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQI 420
           GE+ F +V F Y  Q  +    +L I  GE+VG+VGRSGAGKS++VNLL+RFYD+Q+G I
Sbjct: 360 GEVVFEKVEFAYDKQPPLLKQFDLHICPGERVGLVGRSGAGKSSIVNLLMRFYDIQAGHI 419

Query: 421 RIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHD 480
           RIDGQ I+ V Q+SLR+ IGM+TQDTSLLHRS+R+NILYG PDA    +  AA++A AH+
Sbjct: 420 RIDGQSIASVKQDSLRQQIGMVTQDTSLLHRSVRENILYGRPDASDEEMIVAAKRAEAHE 479

Query: 481 FIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVE 540
           FI  L+D +GRTGYD  VGERGVKLSGGQRQRIAIARV+LKNAPIL++DEATSALDSEVE
Sbjct: 480 FILTLRDAKGRTGYDAHVGERGVKLSGGQRQRIAIARVMLKNAPILVLDEATSALDSEVE 539

Query: 541 SAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLW 600
            AIQ +L  LM GKTVIAIAHRLSTIAAMDRLIV+D+G++VE GTHQ LLA  GIYA+LW
Sbjct: 540 VAIQHHLSQLMEGKTVIAIAHRLSTIAAMDRLIVLDQGRVVETGTHQALLAQDGIYAKLW 599

Query: 601 AHQTGGFIGE 610
            HQ+GGF+GE
Sbjct: 600 THQSGGFLGE 609