Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., lipid A export permease/ATP-binding protein MsbA from Magnetospirillum magneticum AMB-1

 Score =  257 bits (657), Expect = 9e-73
 Identities = 162/482 (33%), Positives = 250/482 (51%), Gaps = 13/482 (2%)

Query: 126 YLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEADKI 185
           +L++  + FF  +  GR+ +++  + + +R  V   +  +   A  ++ ++  +   D  
Sbjct: 111 HLMRLDVAFFHANSTGRILSRLTNDISQMRFAVSDALTGAGKDASSVIFLIGAMFYQDWR 170

Query: 186 LVVPILVWLLFYIAIQVYFVP----RLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSH 241
           L      W  F   I +  +     R++ ++ +      Q+T  +      I  VK +  
Sbjct: 171 LSA----WTFFIFPIAILPIRKLGRRMRKVTANTQEHMGQLTTYLEQAVQGIRVVKAYGM 226

Query: 242 SQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVG 301
            + E     + ++     +Y+  R  ++    ++L+  + +  +        +    T G
Sbjct: 227 EEYEKRKVGALVEMLQDLIYKAARVRSASSPIMELLGGIAITVVILYGGTRVVNGETTPG 286

Query: 302 VIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFG 361
                IT  +      K +      L E +     + + +     I ++  A  L V  G
Sbjct: 287 AFFSFITALMLAYRPIKSLAAMNTNLQEGLAAASRTFSVLDTQPTIFEKDGAADLVVLEG 346

Query: 362 ELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIR 421
            +SF  V F Y   K V D ++L +  G+ V +VG SGAGKST++NLL RFYDV  G + 
Sbjct: 347 NVSFEGVFFTYDGSKAVLDGIDLAVPGGKTVALVGPSGAGKSTVLNLLPRFYDVTDGHVL 406

Query: 422 IDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDF 481
           +DGQD+ +VS  SLR  I +++Q+ +L   SIR NI YG   A    IE AAR A AHDF
Sbjct: 407 VDGQDVRNVSLSSLRSKIALVSQEITLFDDSIRANIAYGRFGATDEEIEAAARSAAAHDF 466

Query: 482 IQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVES 541
           I  L +     GYD  VGERG+ LSGGQRQR+AIAR +LKNAPIL++DEATSALD+E E 
Sbjct: 467 IVSLPE-----GYDTVVGERGLNLSGGQRQRLAIARAMLKNAPILLLDEATSALDTESER 521

Query: 542 AIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWA 601
            +Q  L  LM G+T I IAHRLST+   D + V+D+G+++E G H  L+A  G YA+L+A
Sbjct: 522 QVQTALELLMRGRTTIVIAHRLSTVVNADLIHVLDKGRVIESGDHNALMAKNGTYARLYA 581

Query: 602 HQ 603
            Q
Sbjct: 582 MQ 583