Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) from Escherichia coli BW25113

 Score =  241 bits (615), Expect = 6e-68
 Identities = 168/535 (31%), Positives = 282/535 (52%), Gaps = 37/535 (6%)

Query: 92  VLVVMPILALVHSMLLHQT----------ILGNYPMSIRWSTHRYLLKQSIGFFQRDFAG 141
           VLV MP++ +   +L   T          + G   M++R     +++   + FF +   G
Sbjct: 63  VLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTG 122

Query: 142 RVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEAD-KILVVPILVWLLFYIAI 200
            + +++  ++  V  +    +   V     ++ + +M+     ++ ++ I++  +  IAI
Sbjct: 123 TLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLAPIVSIAI 182

Query: 201 QVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHSQRETTYAKSGMKQFLHTV 260
           +V    R + IS +  N   Q+T            V +F   + ET       K+F   V
Sbjct: 183 RVVS-KRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVET-------KRF-DKV 233

Query: 261 YRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWL--------AETVTVGVIAIGITIALR 312
             +MR     + S   I+  ++  IA+L++   L         +++T G I +  +  + 
Sbjct: 234 SNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIA 293

Query: 313 MQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFGELSFSQVRFGY 372
           +    K +   + A F+       ++ TI +  + +D  + + ++   G++ F  V F Y
Sbjct: 294 LMRPLKSLT-NVNAQFQRGMAACQTLFTILDSEQEKDEGK-RVIERATGDVEFRNVTFTY 351

Query: 373 SAQKT-VFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIRIDGQDISHVS 431
             +      ++NL I AG+ V +VGRSG+GKST+ +L+ RFYD+  G+I +DG D+   +
Sbjct: 352 PGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYT 411

Query: 432 QESLRRHIGMITQDTSLLHRSIRDNILYGNPDA-DQAAIEEAARQAHAHDFIQELQDEQG 490
             SLR  + +++Q+  L + ++ +NI Y   +   +  IEEAAR A+A DFI ++ +   
Sbjct: 412 LASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDN--- 468

Query: 491 RTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVESAIQENLHTL 550
             G D  +GE GV LSGGQRQRIAIAR LL+++PILI+DEATSALD+E E AIQ  L  L
Sbjct: 469 --GLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDEL 526

Query: 551 MAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWAHQTG 605
              +T + IAHRLSTI   D ++V+++G IVE+GTH +LL H+G+YAQL   Q G
Sbjct: 527 QKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQFG 581