Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., lipid A export permease/ATP-binding protein MsbA from Enterobacter asburiae PDN3

 Score =  241 bits (614), Expect = 8e-68
 Identities = 161/506 (31%), Positives = 270/506 (53%), Gaps = 27/506 (5%)

Query: 111 ILGNYPMSIRWSTHRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAV 170
           + G   M++R     +++   + FF +   G + +++  ++  V  +    +   V    
Sbjct: 92  VSGKVVMTMRRRLFSHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSSALITVVREGA 151

Query: 171 YMVSMLVMIAEAD-KILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDT 229
            ++ +  M+     ++ ++ I++  +  IAI+V    R + IS +  N   Q+T      
Sbjct: 152 SIIGLFAMMFYYSWQLSIILIVLAPIVSIAIRVVS-KRFRNISKNMQNTMGQVTTSAEQM 210

Query: 230 YTNITTVKLFSHSQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALS 289
                 V +F     ET       K+F   V  +MR     + S   I+  ++  IA+L+
Sbjct: 211 LKGHKEVLIFGGQDVET-------KRF-DKVSNKMRLQGMKMVSASSISDPIIQLIASLA 262

Query: 290 IQLWL--------AETVTVGVIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTI 341
           +   L         ET+T G I +  +  + +    K +   + A F+       ++ +I
Sbjct: 263 LAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKSLT-NVNAQFQRGMAACQTLFSI 321

Query: 342 ANPVEIEDRPQAKSLQVKFGELSFSQVRFGYSAQKT-VFDDLNLVIQAGEKVGIVGRSGA 400
            +  + +D  + + ++   G++ F  V F Y  ++     ++NL I AG+ V +VGRSG+
Sbjct: 322 LDSEQEKDEGK-RVIERANGDVEFRNVTFTYPGREVPALRNINLSIPAGKTVALVGRSGS 380

Query: 401 GKSTLVNLLLRFYDVQSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYG 460
           GKST+ +L+ RFYD+  G+I +DG D+   + +SLR  + +++Q+  L + ++ +NI Y 
Sbjct: 381 GKSTIASLMTRFYDINEGEILLDGHDLREYTLQSLRNQVALVSQNVHLFNDTVANNIAYA 440

Query: 461 NPDA-DQAAIEEAARQAHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVL 519
             D   +  IE AAR A+A DFI ++ +     G D  +GE GV LSGGQRQRIAIAR L
Sbjct: 441 RTDEYSREQIENAARMAYAMDFINKMDN-----GLDTIIGENGVLLSGGQRQRIAIARAL 495

Query: 520 LKNAPILIMDEATSALDSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGK 579
           L+++PILI+DEATSALD+E E AIQ  L  L   +T + IAHRLSTI   D ++V+++G 
Sbjct: 496 LRDSPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGV 555

Query: 580 IVEQGTHQELLAHKGIYAQLWAHQTG 605
           IVE+G+H +LL H+G+YAQL   Q G
Sbjct: 556 IVERGSHADLLEHRGVYAQLHKMQFG 581