Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  246 bits (629), Expect = 2e-69
 Identities = 163/494 (32%), Positives = 270/494 (54%), Gaps = 30/494 (6%)

Query: 119 IRWSTHRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETV-LKLVDLSVYIAVYMVSMLV 177
           IR S +  L+   + FF +   G + +++  + + +++T  + L +L   I   +   + 
Sbjct: 112 IRLSLYSRLVNLPMSFFDKRRTGELISRITSDVSLLQDTFSVTLAELFRQIITLLAGTVF 171

Query: 178 MIAEADKILVVPILVWLLFYIAIQVY--FVPRLKTISTDQANAQSQMTGRIVDTYTNITT 235
           +     ++ +  +  + +  I   V+  F+ +L   + D+  A + +   + +T  +I+T
Sbjct: 172 LFVTTPRLTLFMLATFPVLVIIAMVFGKFIRKLSKETQDELAAANVI---VEETLQSIST 228

Query: 236 VKLFSHSQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWL- 294
           VK F+    E      G+ + +         L +  +    I++++      +   +W  
Sbjct: 229 VKSFAGEAYEAARYGKGLNKVVKVA------LKAAGFRGAFISFIIFALFGGIVAVMWYG 282

Query: 295 AETVTVGVIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAK 354
           A  V+ G ++IG  ++  +   + +I   I  L +  G V  ++ +    +EI D    +
Sbjct: 283 AMMVSTGAMSIGDLVSFVLY--TTFIGGSIAGLGDIYGQVQKAIGSSERVLEILDESPEE 340

Query: 355 SL------QVKFGELSFSQVRFGYSA--QKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLV 406
           SL       +K G +SFS V F Y    +  V   +N+ IQ+GEK+ + G SGAGKST++
Sbjct: 341 SLADYQEVSIK-GNVSFSDVSFNYPTRPEADVLKHINISIQSGEKIALAGHSGAGKSTII 399

Query: 407 NLLLRFYDVQSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQ 466
            LL++FY +  G+I ID + I + + + LR +IG++ Q+  L   SIR+NI Y  P+A +
Sbjct: 400 QLLMKFYTINFGEITIDDKPIQNWNLKQLRSNIGIVPQEVLLFGGSIRENIAYAKPEATE 459

Query: 467 AAIEEAARQAHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPIL 526
             I EAA++A+A  FI +  +     G D  VGERG+KLSGGQRQRIAIAR +LKN  IL
Sbjct: 460 QEIIEAAKKANAWQFIGKFPE-----GLDTLVGERGIKLSGGQRQRIAIARAILKNPSIL 514

Query: 527 IMDEATSALDSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTH 586
           I+DEATS+LD+E E+ +QE L  LM  +T I IAHRL+TI  +DR+ VM +G+IVE+G+H
Sbjct: 515 ILDEATSSLDAESEALVQEALDELMKNRTTIVIAHRLATIRKVDRIYVMKDGEIVEEGSH 574

Query: 587 QELLAHK-GIYAQL 599
            +L   K G YA L
Sbjct: 575 DDLAVQKGGFYANL 588