Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  249 bits (635), Expect = 3e-70
 Identities = 191/604 (31%), Positives = 291/604 (48%), Gaps = 53/604 (8%)

Query: 17  QEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYMGEIVDILSTQERHQ 76
           Q    P   L  + R Y +G     L   +LS+   +A    VR    I+D       H 
Sbjct: 12  QRSLKPLLGLFPYLRRY-RGLMAAALFALVLSSATTLALPLAVR---RIID-------HG 60

Query: 77  FWEMHGERLWTMAALVLVVMPILALVHSMLLH--QTILGNYPMSIRWSTHRYLLKQSIGF 134
           F    G  + +  A++L +  +LAL  +M  +   TI       +R     +L   S  F
Sbjct: 61  FQTPDGGMINSYFAMLLAIAVVLALASAMRYYYVMTIGERVVADLRRDVFAHLTTLSQQF 120

Query: 135 FQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEADK------ILVV 188
           F  + +G + +++  +   +R        +++   +     + M+           +L +
Sbjct: 121 FDSNRSGELTSRLTADTVQIRSAFGSSASVALRNIIMCCGAVAMMIYTSPGLSGLALLAI 180

Query: 189 PILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHSQRETTY 248
           P +V+ L      V    R +T     AN+ +  +    +T     TV+ F+        
Sbjct: 181 PFIVFPLIAFGRSVR--ARSRTTQDTLANSAAYAS----ETIAASRTVQSFNAE----VL 230

Query: 249 AKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVGVIAIGI- 307
           A +     +   Y+  R        +  +   L+F  + + I  + A+ V  G +  G  
Sbjct: 231 ANARYGASVEAAYQGARAAIGARSVLTAVAIALVFG-SVVGILWYGAQNVLAGSMTAGTL 289

Query: 308 -------TIALRMQGMSKWIMWEIR---ALFESVGTVIDSMNTIANPVEIEDRPQAKSLQ 357
                   IA    G    +  E+       E +  +++  + +A P      PQ     
Sbjct: 290 GQFVLYSVIAASGLGQLSEVWGELAQAGGAAERLSELLNERSPVAEPAAPVAMPQPPR-- 347

Query: 358 VKFGELSFSQVRFGY--SAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDV 415
              GE  F  V F Y  +  + +   L+L + AGE V IVG SGAGKST+ +LL+RFYD 
Sbjct: 348 ---GEAEFDNVDFVYPLATGRPIVSGLSLKVAAGETVAIVGPSGAGKSTVFSLLMRFYDP 404

Query: 416 QSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQ 475
           Q G+I IDG DI +VS   LR  + ++ QD ++   SI DNI +G P+A +  +  AA  
Sbjct: 405 QQGRITIDGVDIRNVSLADLRARLSIVPQDVAIFASSIHDNIAFGRPEATREDVRAAAIA 464

Query: 476 AHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSAL 535
           A A  FI+ L D     GYD QVGERGV LSGGQRQRIAIAR +L++APIL++DEATSAL
Sbjct: 465 AQADGFIERLGD-----GYDTQVGERGVTLSGGQRQRIAIARAILRDAPILLLDEATSAL 519

Query: 536 DSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGI 595
           D+E E+ +Q+ L  LM  +T I IAHRL+T+   DR++VMDEG+I+E+GTHQ L+   G+
Sbjct: 520 DAESETLVQKALDELMKTRTTIVIAHRLATVLKADRILVMDEGRIIEEGTHQSLIRQNGL 579

Query: 596 YAQL 599
           YA+L
Sbjct: 580 YARL 583