Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., ATP-dependent DNA helicase, RecQ family from Pseudomonas fluorescens GW456-L13

 Score =  268 bits (685), Expect = 5e-76
 Identities = 137/339 (40%), Positives = 213/339 (62%), Gaps = 4/339 (1%)

Query: 20  LHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLIS 79
           L +VFGY QFR GQ+  + A LAGR +  I PTG GKSLCYQ+PAL+L  +TLV+SPL++
Sbjct: 5   LEQVFGYPQFRPGQEAAVSAVLAGRSAAAIFPTGSGKSLCYQLPALLLPHLTLVVSPLLA 64

Query: 80  LMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIERLS 139
           LM+DQ+  L+ +G++A  ++S  +R++   +  R  +G+LK+L +S ER+    F   L 
Sbjct: 65  LMQDQLAFLQRHGISAGSIDSAQSRDDASDVMARAKSGELKILMISVERLKNERFRHFLQ 124

Query: 140 HLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIMQRL 199
            +P++++ VDEAHCIS+WGH+FRP+Y  L   +++F    V+ LTATA      D+  + 
Sbjct: 125 QVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQVLLLTATATPKVIADMQAKF 184

Query: 200 QLNEPHQYLGSFDRPNIRYMLVEKHKPVS---QVIRYLETQRGQCGIIYCGSRKKVEMLT 256
            +         F RPN+  +LVE  +      +++ ++  +  Q  I+Y   +K  E + 
Sbjct: 185 AIAADDVVTTGFYRPNLN-LLVEPVRGADKRRRLVEWMSQRPDQPSIVYVTLQKTAEHIA 243

Query: 257 EKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 316
           E L  N I+A +YHAG+  ++R  +Q  F       +VAT+AFGMGI+K ++R VVHFD+
Sbjct: 244 EHLNRNGIQAEAYHAGLPHEQREAIQRRFMGGQSNCIVATIAFGMGIDKSDIRNVVHFDL 303

Query: 317 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML 355
           P++IE+Y QE GRAGRDG P++ ++L +   +N L   +
Sbjct: 304 PKSIENYSQEIGRAGRDGQPSDCLVLANRDSLNVLENFV 342