Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., ATP-dependent DNA helicase RecQ from Xanthobacter sp. DMC5

 Score =  582 bits (1499), Expect = e-170
 Identities = 298/598 (49%), Positives = 403/598 (67%), Gaps = 7/598 (1%)

Query: 14  ATPERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLV 73
           + P  VL  VFGY+ FR  Q+E++E  +AG D+LV+MPTGGGKSLCYQ+PALV  G  +V
Sbjct: 8   SAPLEVLRHVFGYEAFRGRQREIVEHVVAGGDALVLMPTGGGKSLCYQVPALVRPGTGIV 67

Query: 74  ISPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAE 133
           +SPLI+LM DQV  L+  GV A  +NS+LA  E   +   +  G L LLYV+PER+LT  
Sbjct: 68  VSPLIALMHDQVQALRQLGVKAAMLNSSLAPGEGRQVERALAMGDLDLLYVAPERLLTDG 127

Query: 134 FIERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRH 193
           F+  L    +++ A+DEAHC+SQWGHDFRPEY  L  L +R+P VP MALTATAD  TR 
Sbjct: 128 FLNLLDGARISLFAIDEAHCVSQWGHDFRPEYRQLTILHERYPGVPRMALTATADGPTRR 187

Query: 194 DIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVE 253
           +I++RL L E   +L SFDRPNIRY +  K  P  Q+  +L+   G+ GIIYC SR KVE
Sbjct: 188 EIVERLNLEEGQVFLSSFDRPNIRYRIAPKANPRVQLKAFLDAHDGEAGIIYCMSRAKVE 247

Query: 254 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
              E L      A  YHAG+DAD RA  Q+ F +++  ++VAT+AFGMGI+KP+VRFVVH
Sbjct: 248 ATAEMLSTEGRTALPYHAGLDADTRARHQDRFLKEEGVVMVATIAFGMGIDKPDVRFVVH 307

Query: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLD--EKPDGAQKQVESHKL 371
            D+P++IE+YYQETGRAGRDGLP+E ++LY   D+  L + +D  + P+ A+K+VE  KL
Sbjct: 308 LDLPKSIEAYYQETGRAGRDGLPSETLLLYGVEDVAKLIQFVDGSDAPE-ARKRVERSKL 366

Query: 372 TAMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQ 431
            A+   AE  +CRRQVLL YF E   +PCGNCD CL+PP+ FD TE A+K LSCVYR  +
Sbjct: 367 DALLGLAETASCRRQVLLKYFEEDLPQPCGNCDTCLNPPRTFDGTEAAQKLLSCVYRTGE 426

Query: 432 NFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITR 491
            FG G+V++VLRG  N ++ + GHDK++T+GIG + S D W ++ RQL+  G L+ ++  
Sbjct: 427 RFGAGHVIDVLRGDANDKVTKFGHDKLSTFGIGGNFSRDEWRAVVRQLVAMGYLWVDVEG 486

Query: 492 NSTLQLTEEARPLLRGEMNIELAVPRLDTAARAAKSDK----LSGKNYDKKLFAKLRKLR 547
           + +L LTE+ RP+LRGE  +EL       AAR     +          D+ LF KL+KLR
Sbjct: 487 HGSLGLTEKCRPVLRGEERVELKAEARPRAARVTGGGRGPSAALADPADEALFQKLKKLR 546

Query: 548 KSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQE 605
             +A  +G+PPYV+F D TL+ +AE+ PTS   +  ++G+G+ KL +Y   FL +I E
Sbjct: 547 LELARAQGVPPYVIFHDTTLMAIAELKPTSMKALGMISGIGEAKLMRYGQQFLQVIAE 604