Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

 Score =  554 bits (1428), Expect = e-162
 Identities = 274/591 (46%), Positives = 403/591 (68%), Gaps = 5/591 (0%)

Query: 17  ERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISP 76
           +RVL ++FGY  FR  Q  +IE   +G D+LV+MPTGGGKSLC+Q+PAL+  G+ +V+SP
Sbjct: 6   QRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSP 65

Query: 77  LISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIE 136
           LI+LM DQV  L+  GVAA  +NSTL+ E+   +  R+  G++K+LY++PER++    + 
Sbjct: 66  LIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRMLA 125

Query: 137 RLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
            L  L +A+ A+DEAHC+SQWGHDFR EY  LGQL + FP+VP +ALTATAD  TR +I+
Sbjct: 126 FLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEIV 185

Query: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEMLT 256
           +RL L    ++L SFDR NI Y +V K +P  Q++ +L  +R   GI+YC SRKKV+ + 
Sbjct: 186 ERLHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVDEVA 245

Query: 257 EKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 316
             LC     A  YHAG+  D RA+ Q+ F  ++  I+VAT+AFGMGI+K NVRFV H D+
Sbjct: 246 AFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMDL 305

Query: 317 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-DEKPDGAQKQVESHKLTAMG 375
           P+++E+YYQETGRAGRDGLPA+A M+Y   D+  L++ML + + D   K++E HKL AM 
Sbjct: 306 PKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAML 365

Query: 376 AFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNFGI 435
           +  E   CRRQ LL YF E   +PCG+CD C+D  + +DATE AR+ LS +YR  Q +G+
Sbjct: 366 SLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIYRTGQRYGV 425

Query: 436 GYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRNSTL 495
           G++V+VL G  N ++R  GH+K++ YG+G+  +   W S+FRQ++ +G++  +I     L
Sbjct: 426 GHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIEGFGGL 485

Query: 496 QLTEEARPLLRGEMNIEL---AVPRLDTAARAAKSDKLSGKNYDKKLFAKLRKLRKSIAD 552
           +L +  RPLL+GE+++EL     P+    +  +++ +L  +  +++ +  LR LR+ +A 
Sbjct: 486 RLNDSCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLV-RGEEREQWEALRTLRRKLAQ 544

Query: 553 DEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLI 603
           +  +PPYV+F D+TL++M    PTS  EM  V+GVG RKLE+Y   FL+++
Sbjct: 545 EHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVL 595