Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., DNA helicase RecQ from Variovorax sp. OAS795

 Score =  545 bits (1403), Expect = e-159
 Identities = 296/624 (47%), Positives = 406/624 (65%), Gaps = 29/624 (4%)

Query: 3   ATLMAESSALFATPERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQI 62
           A L  ++    + P  +LHEVFGY QFR  QQE+++  + G D+LV+MPTGGGKSLCYQI
Sbjct: 5   APLPLDAPGSSSAPADILHEVFGYSQFRGPQQEIVDHVVGGGDALVLMPTGGGKSLCYQI 64

Query: 63  PALVLE----GVTLVISPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ 118
           PA+  +    GV++V+SPLI+LM DQV  L   GV A  +NSTL  E+   +  RM  G+
Sbjct: 65  PAIARQRAGRGVSVVVSPLIALMHDQVGALHEAGVNAAFLNSTLDWEQTQDVERRMLRGE 124

Query: 119 LKLLYVSPERVLTAEFIERLSHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQR 174
           + LLY +PERV T  F+ +L  L     L++ A+DEAHC+SQWGHDFRPEY +L  L +R
Sbjct: 125 ITLLYAAPERVNTPRFLSQLDSLKERGKLSLFAIDEAHCVSQWGHDFRPEYRALTVLHER 184

Query: 175 FPNVPVMALTATADDATRHDIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL 234
           +P VP +ALTATAD  TR DI++RLQL E  Q++ SFDRPNIRY +VEK    +Q++R++
Sbjct: 185 YPGVPRIALTATADALTRADIVERLQLEEARQFVSSFDRPNIRYTIVEKKDATTQLLRFI 244

Query: 235 ETQR-GQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIV 293
           E +  G  G++YC SRK+VE +   L G  I A  YHAG+DA  R   Q+ F R++  ++
Sbjct: 245 EREHEGDAGVVYCQSRKRVEDVAVMLKGAGINALPYHAGLDAAVRQKHQDRFLREEGIVM 304

Query: 294 VATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRR 353
           VAT+AFGMGI+KP+VRFV H D+P+NIE YYQETGRAGRDG PA+A M Y   D+   RR
Sbjct: 305 VATIAFGMGIDKPDVRFVGHLDMPKNIEGYYQETGRAGRDGAPADAWMTYGLQDVVNQRR 364

Query: 354 MLDEKPDGAQ-KQVESHKLTAMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKR 412
           M+DE P G + KQV   KL A+ + AEA  CRR  LL YFGE +  PCGNCD CL+PP+ 
Sbjct: 365 MIDESPAGEEFKQVMRGKLDALLSLAEASDCRRVRLLGYFGE-QSTPCGNCDNCLNPPQV 423

Query: 413 FDATEEARKALSCVYRVNQ----NFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHS 468
           +D T+ ARK LS +YRV Q    +FG G+++++LRG +  ++++ GH++I+T+G+G + S
Sbjct: 424 WDGTDAARKLLSTIYRVQQLSGISFGAGHIMDILRGKETEKVKQFGHERISTFGLGAEFS 483

Query: 469 HDYWVSIFRQLIHKGMLYQNITRNSTLQLTEEARPLLRGEMNIEL---------AVPRLD 519
                 + RQLI  G L  +    +TL+LTE +R +L+GE N+ L           PR +
Sbjct: 484 EVQLRGVLRQLIATGALAVDAEAFNTLKLTEGSRAVLKGESNVTLRESISSPAERKPRRE 543

Query: 520 TAARAAKSD---KLSGKNYDKKLFAKLRKLRKSIADDEGLPPYVVFSDATLIDMAEIMPT 576
             A+ A S    KL G    +K F  L+  R  +A +  LP YV+F DATL  +AE  P 
Sbjct: 544 KVAKGAPSPAAAKLDGTG--QKRFEALKAWRAEVAREHNLPAYVIFHDATLAAIAERAPA 601

Query: 577 SYGEMLAVNGVGQRKLEKYADPFL 600
           +  ++  ++G+G +KLE Y    L
Sbjct: 602 TLEDLQGISGIGTKKLEAYGTEVL 625