Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 590 a.a., ATP-dependent DNA helicase RecQ from Sphingobium sp. HT1-2

 Score =  462 bits (1189), Expect = e-134
 Identities = 261/590 (44%), Positives = 355/590 (60%), Gaps = 8/590 (1%)

Query: 19  VLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLI 78
           +LH++FG+  FR  Q++V+   +AG+ +L IMPTG GKSLCYQ+PA+ L+G  +V+SPLI
Sbjct: 8   LLHDIFGFTTFRGVQEQVVGRVMAGQPTLAIMPTGAGKSLCYQLPAVALDGCCVVVSPLI 67

Query: 79  SLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIERL 138
           +LM DQ+    A G+ A  + S  A  +     +R+  G+L LLYV+PER     F   L
Sbjct: 68  ALMHDQLRAATAVGIRAASLTSVDA--DWRETQDRLRNGELDLLYVAPERASGEGFRNLL 125

Query: 139 SHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIMQR 198
               +A+ A+DEAHC+S+WGHDFRP+Y  L  L   FP+VP +ALTATAD  TR DI+ +
Sbjct: 126 RSAKVALFAIDEAHCVSEWGHDFRPDYRLLRPLLDEFPDVPRLALTATADAHTRKDILVQ 185

Query: 199 LQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEMLTEK 258
           L + E    +  FDRPNIRY +  +     Q+   L    G  G++Y  +R   E L E 
Sbjct: 186 LGIPEDGLIISGFDRPNIRYAVHPRDGLTRQLADLLAANPGP-GVVYAPTRAATEKLAET 244

Query: 259 LCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPR 318
           L        +YHAGMD  +RA  Q AF   +  ++VATVAFGMGI+KP+VRFV H  +P+
Sbjct: 245 LGRGGRAVRAYHAGMDPAQRAANQAAFIASEDMVMVATVAFGMGIDKPDVRFVAHAGLPK 304

Query: 319 NIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTAMGAFA 378
           +IE YYQE+GRAGRDG PA A + +   D    R+ + E  + A++Q E  ++ A+GA  
Sbjct: 305 SIEGYYQESGRAGRDGEPAVAHLFWGAEDFARARQRIMEL-EPARQQGERARIAALGALV 363

Query: 379 EAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNFGIGYV 438
           E  TCRR +LL +FGE     CGNCD CL PP   DATE ARK LS VYR  Q+FG G++
Sbjct: 364 ETATCRRAILLRHFGEDPPATCGNCDNCLTPPASVDATETARKYLSAVYRTGQSFGAGHI 423

Query: 439 VEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRNSTLQLT 498
             VL G    +IRE GHDKI+ Y I           + R L+ +  L    T +  L L 
Sbjct: 424 EAVLSGAVTDKIRERGHDKISVYAIVDGDETTLLRPVSRALLVRDAL--ETTEHGGLMLG 481

Query: 499 EEARPLLRGEMNIELAV-PRLDTAARAAKSDKLSGKNYDKKLFAKLRKLRKSIADDEGLP 557
             ARP+LRGE  + + V PR +   R A++   +    D  LF  LR  R+ +A D G+P
Sbjct: 482 PNARPILRGEEEVRILVPPRRERKKRNARNGSDANPVGD-PLFDALRTCRRELAQDAGVP 540

Query: 558 PYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQEHL 607
           PYV+F D+TL +MAE  P +  E+  V+GVGQ+KL+ Y D FL  I+ +L
Sbjct: 541 PYVIFHDSTLREMAEQRPATIHELGMVSGVGQKKLDAYGDAFLAAIRPYL 590