Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., ATP-dependent DNA helicase RecQ from Methylophilus sp. DMC18

 Score =  539 bits (1389), Expect = e-157
 Identities = 278/602 (46%), Positives = 399/602 (66%), Gaps = 11/602 (1%)

Query: 15  TPERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVI 74
           +P+++L +VFGY QFR  QQ ++E  ++G+D+LV+MPTGGGKSLCYQIPAL  +G+ +V+
Sbjct: 5   SPQQILQDVFGYNQFRQQQQAIVEHVISGQDALVLMPTGGGKSLCYQIPALARDGLAIVV 64

Query: 75  SPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEF 134
           SPLI+LM+DQV+ L+  GV A  +NS+L+ E+   I  ++ +G++KLLYV+PER++   F
Sbjct: 65  SPLIALMQDQVEALQQLGVNAAFLNSSLSAEDNARITRQVVSGEIKLLYVAPERLMVGSF 124

Query: 135 IERLS----HLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDA 190
           +  L     H+ LA+ A+DEAHC+SQWGHDFRPEY  L  L  RFP VP +ALTATAD  
Sbjct: 125 LSLLDEVQQHVGLALFAIDEAHCVSQWGHDFRPEYRQLTILHNRFPEVPRIALTATADAP 184

Query: 191 TRHDIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQR-GQCGIIYCGSR 249
           TR +I+ +L L    Q++ SFDRPNIRY +  K+    Q+  +LE +     GIIYC SR
Sbjct: 185 TRAEIISQLNLENARQFVSSFDRPNIRYHVGIKNNARQQLQAFLEREHPNDAGIIYCLSR 244

Query: 250 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
           +KVE     L      A  YHAG+ A  R   Q  F R++  I+VAT+AFGMGI+KPNVR
Sbjct: 245 RKVEETAAWLVEKGWSALPYHAGLPAQLRELHQRRFLREEGIIMVATIAFGMGIDKPNVR 304

Query: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDE-KPDGAQKQVES 368
           FV H D+P+++E YYQETGRAGRDGL A A M+Y   D+  +R+MLD  +    +K++E 
Sbjct: 305 FVAHLDLPKSMEGYYQETGRAGRDGLQANAWMVYGMGDVVSMRQMLDSGEASEERKRLER 364

Query: 369 HKLTAMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYR 428
            KL A+  + E+ TCR Q +L YFGE     CG CD CL P + + AT+ A+ ALSCVYR
Sbjct: 365 LKLDALLGYCESTTCRHQSILRYFGESHPGACGQCDNCLHPVETWQATQVAQMALSCVYR 424

Query: 429 VNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQN 488
             Q FG+G++++VL G    ++    HDK++T+GIG+  + + W  ++RQLI  G+L  +
Sbjct: 425 TGQRFGVGHLIDVLIGKVTPQVERFNHDKVSTFGIGKTLNQNQWSGVYRQLIAAGLLEAD 484

Query: 489 ITRNSTLQLTEEARPLLRGEMNIEL---AVP--RLDTAARAAKSDKLSGKNYDKKLFAKL 543
           +     L+LTE ARP+L+GE  + L   A P  R+  A R+A++ +      D  L+  L
Sbjct: 485 MAAYGGLKLTEAARPVLKGEQEVWLRRDAEPEKRMSKAERSARAKEAFEGANDDPLWQAL 544

Query: 544 RKLRKSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLI 603
           +  R  +A ++G+PPYV+F D+TL+++    P +  EM  ++G+GQ KL+KY D FL ++
Sbjct: 545 KAKRLELAREQGVPPYVIFHDSTLLEIHNRKPQTLDEMGQISGIGQAKLQKYGDAFLQVL 604

Query: 604 QE 605
           +E
Sbjct: 605 EE 606