Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., DNA helicase RecQ from Magnetospirillum magneticum AMB-1

 Score =  542 bits (1396), Expect = e-158
 Identities = 280/601 (46%), Positives = 382/601 (63%), Gaps = 16/601 (2%)

Query: 16  PERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVIS 75
           P  +L  VFG+  FR  Q+EVI   + G D+LV+MPTG GKSLCYQ+PAL  +GV +V+S
Sbjct: 9   PLHILKTVFGFPAFRGQQEEVIRHVVEGGDALVLMPTGAGKSLCYQVPALCRDGVAIVVS 68

Query: 76  PLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFI 135
           PLI+LM++QV+ L   GV A  +NS  + +E   I  RM AG+L L+YV+PER++   F+
Sbjct: 69  PLIALMQNQVEALTQLGVRAAALNSARSPDEARVIERRMQAGELDLVYVAPERLVLPGFL 128

Query: 136 ERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 195
             L    +A+ A+DEAHC+SQWGHDFRPEY  L  L +RFP VP +ALTATAD  TR DI
Sbjct: 129 SLLEDCRIALFAIDEAHCVSQWGHDFRPEYLQLALLHERFPAVPRIALTATADGPTRRDI 188

Query: 196 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRG----QCGIIYCGSRKK 251
            +RL L +  Q++  FDRPNIRY +  K+    Q+ R++E + G      GI+YC SR K
Sbjct: 189 AERLNLQDGRQFVAGFDRPNIRYRIAAKNNAREQLARFIEAEHGGPGADSGIVYCLSRAK 248

Query: 252 VEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFV 311
           VE     L G    A +YHAG+D   RA  QE F R+D  ++VAT+AFGMGI+KP+VRFV
Sbjct: 249 VEETAAWLAGKGYTALAYHAGLDQSVRAGNQERFLREDGIVMVATIAFGMGIDKPDVRFV 308

Query: 312 VHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-DEKPDGAQKQVESHK 370
            H D+P+++E+YYQETGRAGRDG PA+A M Y   D+  L + +   +   AQK++E  K
Sbjct: 309 AHLDLPKSLEAYYQETGRAGRDGQPADAWMAYGLEDVAKLGQFIASSQASDAQKRIEWQK 368

Query: 371 LTAMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVN 430
           L A+    E   CRRQVLL YFGE    PCGNCD CL+P   FD TE ARKALSCVYR  
Sbjct: 369 LNALLGLCETTRCRRQVLLEYFGETDHPPCGNCDTCLEPIASFDGTELARKALSCVYRTG 428

Query: 431 QNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNIT 490
           ++FG G+V++VL G  N ++R  GH++++T+GIG +   + W S+ RQL+  G+L  +  
Sbjct: 429 ESFGAGHVIDVLLGKDNDKVRRFGHERLSTFGIGTELPAEQWRSVLRQLVAAGLLSIDTE 488

Query: 491 RNSTLQLTEEARPLLRGEMNIELAVPRLDTAARAAKSDKLSGKNY--------DKKLFAK 542
            +   +LTE  RP+LR E+ ++L   R D      KS    GK          D+ LF  
Sbjct: 489 GHGAFKLTEACRPVLRSEVRVDL---RRDPLPARGKSKSSGGKKTAIALSEPGDEALFQH 545

Query: 543 LRKLRKSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDL 602
           LR  R ++A  +G+P YV+  DATL+++A   P   G++  + G+G+ K E+Y    LD 
Sbjct: 546 LRAERVALAKAQGVPSYVIMHDATLLEVARRRPRQPGDLADIPGLGEAKRERYGQILLDA 605

Query: 603 I 603
           +
Sbjct: 606 V 606