Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., ATP-dependent RNA helicase DeaD from Escherichia coli ECOR27

 Score = 69.3 bits (168), Expect = 5e-16
 Identities = 85/351 (24%), Positives = 145/351 (41%), Gaps = 36/351 (10%)

Query: 25  GYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPAL------VLEGVTLVISPLI 78
           GY++    Q E I   L GRD L +  TG GK+  + +P L      +     LV++P  
Sbjct: 25  GYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTR 84

Query: 79  SLMKDQVDQLKANGVAAECVNSTLAREELIAIYN-RMHAGQLKLLYVSPERVLTAEFIER 137
            L     + +         VN       ++A+Y  + +  QL+ L   P+ V+       
Sbjct: 85  ELAVQVAEAMTDFSKHMRGVN-------VVALYGGQRYDVQLRALRQGPQIVVGTPG-RL 136

Query: 138 LSHLP--------LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMAL-TATAD 188
           L HL         L+ + +DEA  + + G         +  +  + P     AL +AT  
Sbjct: 137 LDHLKRGTLDLSKLSGLVLDEADEMLRMGF-----IEDVETIMAQIPEGHQTALFSATMP 191

Query: 189 DATRHDIMQRLQLNEPHQYL---GSFDRPNIR--YMLVEKHKPVSQVIRYLETQRGQCGI 243
           +A R   + R  + EP +         RP+I   Y  V   +    ++R+LE +     I
Sbjct: 192 EAIRR--ITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAI 249

Query: 244 IYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGI 303
           I+  ++     + E L  N   +A+ +  M+   R    E  +   L I++AT     G+
Sbjct: 250 IFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGL 309

Query: 304 NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRM 354
           +   +  VV++DIP + ESY    GR GR G    A++  +  +   LR +
Sbjct: 310 DVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360