Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  530 bits (1366), Expect = e-155
 Identities = 271/598 (45%), Positives = 388/598 (64%), Gaps = 9/598 (1%)

Query: 15  TPERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVI 74
           TP+ VL   +GY  FR  Q+ +I++ L  +D++V+MPTGGGKS+CYQIPA+V +G+TLVI
Sbjct: 3   TPKEVLKNFYGYDSFRGQQEAIIQSILKQQDTIVLMPTGGGKSVCYQIPAMVNDGLTLVI 62

Query: 75  SPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEF 134
           SPLI+LMKDQVD L   G+ A  +NS+ +  E   +   + +G+LKLLYV+PER+    F
Sbjct: 63  SPLIALMKDQVDALNGMGIPAAYLNSSQSASEQRFVSEEIRSGKLKLLYVAPERLFGGAF 122

Query: 135 --IERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATR 192
              E L    L+++A+DEAHC+SQWGHDFRP+Y  +G+L+Q  P+VP +ALTATAD  TR
Sbjct: 123 PLTETLKTSRLSLVAIDEAHCVSQWGHDFRPDYLMIGRLRQELPDVPFVALTATADKQTR 182

Query: 193 HDIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKV 252
            DI  +L L +P  ++ SFDRPNI Y +V K     +++ +LE  +   GIIYC SRK V
Sbjct: 183 ADIADKLGLRKPKWFISSFDRPNITYRIVPKRNSFEKLLDFLEYHQKNSGIIYCLSRKNV 242

Query: 253 EMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVV 312
           E +  +L    + A  YHAG+D   RA  QE F +D ++I+VAT+AFGMGI+K NVRFVV
Sbjct: 243 EDMAGRLQAAGLSALPYHAGLDRQTRASHQEKFIKDKVKIMVATIAFGMGIDKSNVRFVV 302

Query: 313 HFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLT 372
           H ++P+NIE YYQETGRAGRDGLP++A++ Y  AD+  L+RM+D   +    +V   KL 
Sbjct: 303 HMNMPQNIEGYYQETGRAGRDGLPSDALLFYSYADVMTLQRMIDTPDNPDYSEVMLAKLE 362

Query: 373 AMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQN 432
            M  F ++ TCRR+ LL YF E   K CGNCD CL    + D T  A+  LS + R+ +N
Sbjct: 363 KMKQFCQSNTCRRRYLLGYFDEEEQKDCGNCDRCLSKDNKQDMTVPAQMLLSTIVRLKEN 422

Query: 433 FGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRN 492
           +G+GY V VLRG ++ +++E  H  +T YGIG++ S D+W  + + L  +G L +  T+ 
Sbjct: 423 YGLGYCVLVLRGSKSAKVQEE-HKALTVYGIGKEKSEDFWKKLGQHLQQEGYLAEAGTQF 481

Query: 493 STLQLTEEARPLLRGEMNIELAVPRLDTAARAAKSDKLSGKNYDKKLFAKLRKLRKSIAD 552
            TL+LT  A   L+G+    L +             + +   Y++ LF +L+++R  +A 
Sbjct: 482 PTLKLTTIAWEKLKGKKKFLLQM------GEGGFDHQPTTVAYEEGLFEELKRIRFGLAQ 535

Query: 553 DEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQEHLTYH 610
            E +PPYV+FSD TL++MA+ +P  +   L ++GVGQRK E Y D FL +I+ +   H
Sbjct: 536 KENVPPYVIFSDNTLVEMAQYLPHDHDSFLQISGVGQRKAENYEDHFLPVIKSYAAEH 593