Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 613 a.a., ATP-dependent DNA helicase RecQ from Alteromonas macleodii MIT1002

 Score =  665 bits (1717), Expect = 0.0
 Identities = 329/602 (54%), Positives = 437/602 (72%), Gaps = 2/602 (0%)

Query: 6   MAESSALFATPERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPAL 65
           +A  +     PE VL +VFGY  FR GQ EVI     G+D+LV++PTGGGKSLCYQIPAL
Sbjct: 10  LAPETQRVKAPETVLKDVFGYDAFRDGQGEVIHQVCEGKDALVLLPTGGGKSLCYQIPAL 69

Query: 66  VLEGVTLVISPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVS 125
           V +G  +V+SPLISLM+DQV+QLKA GV A  +NSTL  +E   I + + AG+L LLYVS
Sbjct: 70  VRQGTAIVVSPLISLMQDQVEQLKALGVKAAYLNSTLETDEQARINDALQAGKLDLLYVS 129

Query: 126 PERVLTAEFIERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTA 185
           PER++   F + L+H  +A+ A+DEAHC+S WGHDFR +Y +LGQ+K RFP++PV+ LTA
Sbjct: 130 PERLMQYYFQQSLAHADIALFAIDEAHCVSHWGHDFRQDYRALGQIKSRFPSIPVIGLTA 189

Query: 186 TADDATRHDIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIY 245
           TAD AT+ DI+ +L LN+P  Y GSFDRPNIRY ++ K+K   QV+ Y++ Q G  GIIY
Sbjct: 190 TADSATQADILTQLNLNDPLVYKGSFDRPNIRYRVMSKYKAFDQVVAYVKQQEGS-GIIY 248

Query: 246 CGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINK 305
           C SR KV+ L  KL     R A+YHAGMD DER  VQ  F  D + IVVATVAFGMGINK
Sbjct: 249 CNSRAKVDDLHAKLFRQGFRCAAYHAGMDNDERELVQRQFLNDKIDIVVATVAFGMGINK 308

Query: 306 PNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQ 365
            NVR+VVH D+PR++ESYYQETGRAGRDGL +EA++L+D  D   +++ +++     + Q
Sbjct: 309 SNVRYVVHHDVPRSVESYYQETGRAGRDGLESEALLLFDEKDAARVKQWIEQGEIAERNQ 368

Query: 366 VESHKLTAMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSC 425
           +E  K  AM AF+EAQTCRRQVLLNYF ++ D  CGNCDICLDPPK  D    A+K LSC
Sbjct: 369 IELQKFAAMEAFSEAQTCRRQVLLNYFSQFSDSACGNCDICLDPPKMIDGLVIAQKVLSC 428

Query: 426 VYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGML 485
           V R++Q     YV++VLRG Q  R++E GH +++TYGIG+D S  YW +I  QL+HKG++
Sbjct: 429 VLRLSQQASSQYVIDVLRGKQLRRLQEAGHHQLSTYGIGKDKSDSYWHNIINQLVHKGLI 488

Query: 486 YQNITRNSTLQLTEEARPLLRGEMNIELAVPRLDTAARAAKSDKLSGKNYDKKLFAKLRK 545
             +IT ++ L+LTE ARP+L+GE+ ++LAVPRL+      K+ K +  NYD+ LF +L+ 
Sbjct: 489 RVDITAHAALRLTEAARPVLKGEVAVQLAVPRLEFKPDKKKA-KQAPANYDRTLFTRLKH 547

Query: 546 LRKSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQE 605
           LRK +A++  +PPYVVFSDATL+DMA  +PT+   +L V+GVGQ KLE+Y + F+ LI +
Sbjct: 548 LRKVLAEENEVPPYVVFSDATLVDMACKLPTTRNTLLDVSGVGQTKLERYGEAFIQLIDD 607

Query: 606 HL 607
           ++
Sbjct: 608 YI 609