Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., chloramphenical resistance permease RarD from Pseudomonas simiae WCS417

 Score =  261 bits (667), Expect = 1e-74
 Identities = 129/280 (46%), Positives = 186/280 (66%)

Query: 11  KKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSVVGV 70
           +KG +L +SAY +WG+ P+YFKA+ +V A EI+ HRV+WS +   +L+ + +       +
Sbjct: 7   RKGYILGLSAYVIWGLFPLYFKAIASVPAAEIIVHRVLWSALFGGLLLMVWKHPGWFREL 66

Query: 71  VHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERLR 130
              P++  +L ++  L+ GNWL ++WS+N   ML+ASLGYYINPL+NV+LGML LGERLR
Sbjct: 67  RDNPKRLAILALSGSLIAGNWLTYVWSVNTGRMLEASLGYYINPLVNVVLGMLILGERLR 126

Query: 131 KLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETLFM 190
           +LQW AV LAA+GV  Q+   GS+P V++ LA +FGFYGL+RK+  V A  GL +ET  +
Sbjct: 127 RLQWVAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLVVETWML 186

Query: 191 LPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGFFQ 250
           +P A  +L++     ++ MA  +      LV AG VT +PL+CF  AA  L  + LGF Q
Sbjct: 187 VPIAVAWLLFNPTAHSAQMAFWSTSEAWWLVAAGPVTLIPLVCFNAAARHLPYTALGFLQ 246

Query: 251 YIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVD 290
           Y+ P+L+ L AVL++GE         FAFIW+ LV++SVD
Sbjct: 247 YVAPTLVLLEAVLLFGEHLAPSTLTAFAFIWAGLVVYSVD 286