Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., chloramphenicol-sensitive protein from Pseudomonas putida KT2440

 Score =  122 bits (305), Expect = 1e-32
 Identities = 85/298 (28%), Positives = 152/298 (51%), Gaps = 15/298 (5%)

Query: 12  KGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSVVGVV 71
           KGI+ ++ A  ++ +   Y   L  +   EI   R + +   L + + + + W+ V  ++
Sbjct: 3   KGIVSSVMASCLFAVMYFYTSLLKPLDGEEIFGWRTLLTLPCLTLFMLVSKDWKRVGELM 62

Query: 72  HTPRKFWLLLVTALLVGGNWL------IFIWSINANHMLDASLGYYINPLLNVLLGMLFL 125
              ++  +LL+   +VG +WL      +F+W+      L+ S+GY++ PL  VL G L  
Sbjct: 63  GRVKRTPVLLLG--MVGTSWLMGVQLWLFLWAPLHGRSLEVSMGYFLLPLAMVLTGRLVY 120

Query: 126 GERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFL 185
           GERL +LQ  AVA AA+GVG +L   GS     + +   +  Y +LR++ + D   GL+ 
Sbjct: 121 GERLSRLQTVAVACAALGVGHELYQNGSFAWETLLVTIGYPVYFVLRRRCRTDNLGGLWC 180

Query: 186 ETLFMLPAAAIYLIWLADTPTSDMALNTWQ-LNLLLVCAGVVTTLPLLCFTGAAARLKLS 244
           +   +LP A  ++I    +P S   L     L +L+   G ++   L+ +  A+  L  S
Sbjct: 181 DMCLLLPWALYFVI---QSPLSSADLQAHPGLYVLVPILGAISASALIAYVLASRMLPFS 237

Query: 245 TLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARRAR 302
             G   Y+ P L+  +A+L+ GE    D+ +T+  IW+A+++  ++G K  H  R+ R
Sbjct: 238 LFGLLSYVEPVLLVGVALLL-GETIGPDQWLTYLPIWAAVLVLVLEGFK--HLLRQRR 292