Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  259 bits (661), Expect = 7e-74
 Identities = 131/283 (46%), Positives = 190/283 (67%), Gaps = 6/283 (2%)

Query: 11  KKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRR---WRSV 67
           ++G +L +SAY +WG+ P+YFKA+ +V A+EI+ HRV+WS +  ++L+ + +    WR +
Sbjct: 7   RRGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWKHPGWWREL 66

Query: 68  VGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGE 127
               + PR+  +L ++  L+ GNWL ++WS+N   ML+ASLGYYINPL+NVLLGML LGE
Sbjct: 67  R---NNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLILGE 123

Query: 128 RLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLET 187
           RLR+LQW AV +AA+GV  Q+   GS+P V++ LA SFGFYGL+RK+  V A  GL +ET
Sbjct: 124 RLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLVVET 183

Query: 188 LFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLG 247
             ++P A  +L+      ++  A  T    L L+ AG VT +PL+CF  AA  L  +TLG
Sbjct: 184 WMLVPLALGWLLLHPTAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLPYTTLG 243

Query: 248 FFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVD 290
           F QY+ P+L+ L AV+++ E  +S     F FIW+ L I+SVD
Sbjct: 244 FLQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVD 286