Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., Protein RarD from Pseudomonas sp. DMC3

 Score =  121 bits (303), Expect = 3e-32
 Identities = 85/302 (28%), Positives = 147/302 (48%), Gaps = 13/302 (4%)

Query: 7   QQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRS 66
           +    KGI L++SA  ++ +   Y   L  +S +EI   R++ +   + V + +   WR 
Sbjct: 48  ENSLSKGIALSVSASVLFAVMYYYTSLLTPLSGVEIFGWRMLLTVPCMTVFMLVSGEWRR 107

Query: 67  VVGVVHT----PRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGM 122
           V+ +       P+    LLV++ L+G    +F+W+   ++ LD SLGY++ PL  VL G 
Sbjct: 108 VLELFRLMAARPKLIAGLLVSSALLGVQLWLFMWAPLNDYSLDVSLGYFLLPLAMVLTGR 167

Query: 123 LFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTG 182
           +  GE L  LQ  AV  A++G   +L   G      + +   +  Y +LRK ++ D   G
Sbjct: 168 IAYGESLSYLQKIAVFFASLGALNELYQVGGFSWATLVVVVGYPLYFVLRKYLKTDNLGG 227

Query: 183 LFLETLFMLPAAAIYLIWLADTPTSDMALNTWQLNL--LLVCAGVVTTLPLLCFTGAAAR 240
           L+++   MLP A     W        +A+      L  L+   G+++   L+ +  A+  
Sbjct: 228 LWVDMTLMLPVA----YWFVQGGEQGLAVFDQYPGLMWLIPLLGLISASALVVYIIASRL 283

Query: 241 LKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARR 300
           L  S  G   Y+ P L+  +A+L+ GE+  S + +T+  IW A+V+   +G K  H  R+
Sbjct: 284 LPFSLFGLLSYVEPVLLLAVALLL-GESIKSGEWLTYIPIWLAVVVLVFEGFK--HLTRQ 340

Query: 301 AR 302
            R
Sbjct: 341 RR 342