Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., permease from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  107 bits (267), Expect = 4e-28
 Identities = 86/283 (30%), Positives = 139/283 (49%), Gaps = 16/283 (5%)

Query: 18  ISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRR------WRSVVGVV 71
           ++A+ +WG  P   KAL A  + +IL  RV  S  LL ++  L RR      WR +    
Sbjct: 14  LAAFVIWGFIPFPLKALAAYPSGQILYFRVALSAALLLLISLLFRRKQLQATWRQLTSSS 73

Query: 72  HTPRKFWLLL--VTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERL 129
              R+ + L   +   L+  NWL FI+ +N   +   S  Y + P++  +LG L L E L
Sbjct: 74  TRERRLFALFTFLGGALLTTNWLTFIYVVNHIDIQTGSFSYLLCPIITAVLGFLLLKEEL 133

Query: 130 RKLQWFAVALAAIGVGIQLVVFGSVP--IVAIALATSFGFYGLLRKKIQVDAQTGLFLET 187
           R  QW A+ L+A+     LV  G +   + ++ +A S+ FY L+ ++I + A   + L  
Sbjct: 134 RVNQWLAIGLSALSCA--LVGSGEITSLLFSLLIALSYAFY-LITQRI-LKAYDKIVLLK 189

Query: 188 LFMLPAAAIYLIWLADTPTSDMALNTW-QLNLLLVCAGVVTTLPLLCFTGAAARLKLSTL 246
           L +L A A    +         AL+++  L + L+ AG  T LPL     A   L   T+
Sbjct: 190 LQLLLAFAFIGPFYTSFAGEGAALDSYFFLQVGLLSAG-FTVLPLFLNLFALKELTSGTI 248

Query: 247 GFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSV 289
           G   YI P L F++A L +GE  T  K   +  I+ +++I+++
Sbjct: 249 GILMYINPILNFVMAFLYFGEHTTGTKIAAYLLIFVSVIIYNL 291