Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., Chloramphenicol-sensitive protein rarD from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  124 bits (312), Expect = 2e-33
 Identities = 74/250 (29%), Positives = 129/250 (51%), Gaps = 3/250 (1%)

Query: 53  LLAVLIHLGRRWRSVVGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYI 112
           L+ +L  + R+      +V    K  ++ V A ++   W ++++ +  N +L+A LGYY+
Sbjct: 3   LMPLLFFVYRKGAQFRQLVRDVTKLPVVAVCAAILAVWWFLYMYCVTNNRVLEAGLGYYL 62

Query: 113 NPLLNVLLGMLFLGERLRKLQWFAVALAAIGVGIQLVVF-GSVPIVAIALATSFGFYGLL 171
            P+  V++GM+FL ER+ +    +V ++  G+G   +   GS P +AI L   +  Y + 
Sbjct: 63  GPIFTVVMGMVFLRERIDRWSAASVLVSFAGIGYYAIATQGSFPFLAIGLGLCYAGYTVY 122

Query: 172 RK-KIQVDAQTGLFLETLFMLPAAA-IYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTL 229
           ++  +  DAQ  + LE L +LPAA  I+  ++           +   N+LL   GV+  L
Sbjct: 123 KRANVNFDAQVSVALELLALLPAAMLIFAHYVQQGSLQSFRTTSLTDNVLLFMLGVINVL 182

Query: 230 PLLCFTGAAARLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSV 289
           P+  +T A   L    + F QYI P+  FLLAV  + E F+    I F  +W+ + I++V
Sbjct: 183 PMWWYTVATRNLPTVPMSFLQYISPTCNFLLAVFWFAEPFSRHSLIMFLLVWTGVGIYTV 242

Query: 290 DGLKAGHAAR 299
             +   H+AR
Sbjct: 243 RTIHRMHSAR 252