Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., FIG00761799: membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  160 bits (406), Expect = 3e-44
 Identities = 94/292 (32%), Positives = 151/292 (51%), Gaps = 4/292 (1%)

Query: 11  KKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSVVGV 70
           + G +  + A+ +WG+ P+Y++ L   +  +IL +RV WS  LL  +  L R+       
Sbjct: 6   RSGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLAVRLLFRQRTRFHDA 65

Query: 71  VHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERLR 130
               + F+  ++  LL+  +W  FI+++  + +LDASLGY+INPL  + LG +FL E+L 
Sbjct: 66  WKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKLS 125

Query: 131 KLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETLFM 190
             Q  AV     G+  Q+++    P +A+ +  SF  YGL RK I  D  T + +ETL+ 
Sbjct: 126 LFQAIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLWA 185

Query: 191 LPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGFFQ 250
           LP +   LI+L       ++ NT     L V    VT +PL+ F  A     L   G  Q
Sbjct: 186 LPVS--LLIFLFSDTGPIISANT--PFFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLAQ 241

Query: 251 YIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARRAR 302
           YI PSL FLLA++++GE     + + F  +W  L +   + L + +   R +
Sbjct: 242 YIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293