Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., EamA family transporter RarD from Escherichia coli ECRC62

 Score =  363 bits (933), Expect = e-105
 Identities = 171/287 (59%), Positives = 228/287 (79%)

Query: 6   DQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWR 65
           D +  ++G+LLA++AY +WGIAP YFK +  V A EIL+HRV+WSF  + VL+ + R+W 
Sbjct: 2   DAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQWS 61

Query: 66  SVVGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFL 125
            +  ++ TP+K ++L V+A+L+GGNWL+FIW++N +HML+ASLGY+INPL+N++LGM+FL
Sbjct: 62  YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121

Query: 126 GERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFL 185
           GER R++QW AV LA  GV +QL  FGS+PI+A+ LA SF FYGL+RKKI V+AQTG+ +
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181

Query: 186 ETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLST 245
           ET+++LP AAIYL  +AD+ TS M  N   LNLLL+ AG+VTT+PLLCFT AA RL+LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241

Query: 246 LGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGL 292
           LGFFQYIGP+LMFLLAV  YGE   +DK +TFAFIW AL IF +D +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI 288