Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 65.1 bits (157), Expect = 1e-15
 Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 18/239 (7%)

Query: 29  FERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHAHSNTGYQVQVFS 88
           FE H+H +  +G I +G   F   G     G G +VLM+P  LH     S  G+++ +  
Sbjct: 19  FELHWHAEWSVGAILEGRCEFTCAGERRIAGAGDIVLMAPFMLHTAGV-SAQGFRMVMLY 77

Query: 89  IEPEWLQQTLEANQIEQVIGFEQLIVQ----DPTLFHSLQQLHHLLRQDNLSQLAKDCLP 144
           +   W +      ++   +G    ++     D  +  +L           + +L +  L 
Sbjct: 78  VPHAWAEA-----RLGWPVGLRGELLNGVWHDAAMADALACAARSGDGVAVGRLLEHVLR 132

Query: 145 YQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQPIRLEQLAQLCQLSPTQFQR 204
            Q    L+        P  +  G   +  +   + ++    I    LA    +S   F R
Sbjct: 133 AQTGRELV--------PVERRAGDERVEAICTALETEDACRIDPGALASRLGVSREHFHR 184

Query: 205 HFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHFSKAFKATYGLSP 263
            F+   G+ P  + R  R+ +A  LL+ G+   DVA Q GF DQAHFS+ F+  +G++P
Sbjct: 185 LFRVAVGMAPAHYARLARIGRAKALLREGRAQADVAAQCGFADQAHFSRWFRRCFGVTP 243