Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 96.3 bits (238), Expect = 6e-25
 Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 3/252 (1%)

Query: 15  PAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDG 74
           P + ++ AD+    +  H H    I +   G   F  +G      Q  +++ +P E H G
Sbjct: 19  PGMDMLHADFTTHEYAPHVHHSFVIAVTEVGGAEFKSRGRTDIAHQQALLVFNPSEPHSG 78

Query: 75  HAHSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIVQDPTLFHSLQQLHHLL--RQ 132
               ++ ++ + F +    ++  L    I+Q   F   I+ D  L  S  +LH      +
Sbjct: 79  RMGGSSRWRYRAFYLAEPGIRHLLTTLGIDQTRYFMSNILGDRELIASFLELHRAFDGHR 138

Query: 133 DNLSQLAKDCLPYQGFAPLLERYSYLKQPTVK-PLGQHNLALLKEWVLSQLDQPIRLEQL 191
           +    L +  L    F  L + +    Q  +  P     LA + E +     + + LEQ+
Sbjct: 139 EQWDALRQQELFVHSFGSLFQSHGQAGQRVLGVPADAQVLAPVLELLHDAFAERLTLEQM 198

Query: 192 AQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHF 251
           A    L+P Q    F    GLTP+ +L +LRL  A+  L +G+P  + A   GFYDQ+  
Sbjct: 199 AAAADLTPFQLIGAFNRTIGLTPHTYLTQLRLRAAIAQLAAGRPLIEAAIASGFYDQSAL 258

Query: 252 SKAFKATYGLSP 263
           +K FK T+G++P
Sbjct: 259 TKHFKRTFGMTP 270