Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  123 bits (309), Expect = 4e-33
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 7/259 (2%)

Query: 14  YPAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHD 73
           +  + L++A Y    F RH H    +G+I +G Q FY  G  H   Q  ++L++ DE+H 
Sbjct: 21  FGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHT 80

Query: 74  GHAHSNTGYQVQVFSIEPEWLQQTLEANQIEQVIG---FEQLIVQDPTLFHSLQQLHHLL 130
           GH+    G+  +     PE  Q    A +I    G   F Q +V DP L   L+ +   L
Sbjct: 81  GHSAVEGGWAYKAMYPLPE--QFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFETL 138

Query: 131 RQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQ-HNLALLKEWVLSQLDQPIRLE 189
            +   ++L ++ L Y     L+ R+        +PL     L L+KE++       + LE
Sbjct: 139 EKST-NRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADVSLE 197

Query: 190 QLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQA 249
           +LAQL  LSP    R F+ Q GL P+A+  + RL  A  LL+ G   ++ A + GF+DQ+
Sbjct: 198 ELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQS 257

Query: 250 HFSKAFKATYGLSPSLITR 268
           H  + FK   G++P    R
Sbjct: 258 HLHRHFKKALGITPKQYAR 276