Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 23/262 (8%)

Query: 15  PAISLIE---ADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQ-VGQGGVVLMSPDE 70
           PA++ +E   A + +  ++ H H    IG +  G   F       Q +  G +VL+    
Sbjct: 12  PALAHVESRRACHSRACYKAHSHPTFSIGAVDAGRSHFTGAADGQQHLAPGTLVLVPAHR 71

Query: 71  LHDGHAHSNTGYQVQVFSIEPEWLQQT-LEANQIEQVIGFEQLIVQDPTLFHSLQQLHHL 129
           +H  +      +  Q+  ++ +WL Q  LE+       G    I ++  ++     L+ L
Sbjct: 72  VHACNPAPGLAWSYQMLHVDADWLTQLRLESGLGGIEAGEPVRICREAEVYRQFCALNRL 131

Query: 130 LRQDNLSQLAKDC--------LPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQ 181
           L     +   KD         L +    PL    + L+  T+  L    LA ++    +Q
Sbjct: 132 LFSSACNG-EKDAALIAFLGDLDFSAHPPLAAAPA-LQAATLNGL----LARIEHQDPAQ 185

Query: 182 LDQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAY 241
           L     LE LA+   L   Q  R F+A TG TP+A+L   R+ +  +LL  G    +VAY
Sbjct: 186 LS----LEVLAREAGLGRYQLIRAFRAATGFTPHAYLLNARVNRGRQLLSEGLALAEVAY 241

Query: 242 QVGFYDQAHFSKAFKATYGLSP 263
           Q+GF DQ+HF + FKA  G++P
Sbjct: 242 QLGFADQSHFQRVFKAHVGVTP 263