Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., AraC family transcriptional regulator from Pseudomonas segetis P6

 Score =  102 bits (254), Expect = 9e-27
 Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 20/263 (7%)

Query: 15  PAISLIEA----DYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDE 70
           PA+  IEA    D R+  +  H H    IG+IT G   + +      + QG  VLM+P  
Sbjct: 12  PALPAIEARSIIDGRKVCYALHAHAHFSIGVITAGACTYINGAQRQAISQGTTVLMNPQA 71

Query: 71  LHDGHAHSNTGYQVQVFSIEPEWL---QQTLEANQIEQVIGFEQLIVQDPTLFHSLQQLH 127
           +H  +      +  ++  ++ +WL   Q ++    IEQ   ++ ++   PTLF +  Q +
Sbjct: 72  VHACNPIDEQPWSYRMLYVDCQWLARGQASVRRLSIEQFQAYQPILSLSPTLFEAFNQFY 131

Query: 128 HLLRQDNL-------SQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLS 180
             L   +L       S LA   L  +  AP ++  S  +Q   K      L L   ++  
Sbjct: 132 DKLLDTSLAPGQKQASALAFFTLMDRTLAPSIDAASEPEQAHAK------LELAAAFIRE 185

Query: 181 QLDQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVA 240
              QP+ L+Q++    LS +   R F+   G+TP+ +L   R++ A +LL+ G+   D A
Sbjct: 186 NCAQPLSLQQISDAAGLSRSYMIRAFRQHFGMTPHTYLTNQRVQLAQRLLKRGELIVDAA 245

Query: 241 YQVGFYDQAHFSKAFKATYGLSP 263
              GF DQAH  + FK     +P
Sbjct: 246 LAAGFADQAHLQRTFKQFMAATP 268