Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  117 bits (293), Expect = 3e-31
 Identities = 83/272 (30%), Positives = 131/272 (48%), Gaps = 13/272 (4%)

Query: 1   MVSMDTVNYRPSAYPAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQ 60
           M + + ++    A   I  + A +   A++ H+H    IG+  QGVQ+F  +   H    
Sbjct: 1   MAAHNWIDLSQDADTGIETLRAHFEGHAYDPHWHDSYLIGVTEQGVQQFNCRRTRHHSVP 60

Query: 61  GGVVLMSPDELHDGHAHSNTGYQVQVFSIEPEWLQQTL-----EANQIEQVIGFEQLIVQ 115
           G V L+ P ELHDG A +  G+   +  ++P WL + +     EA Q  Q + F   +  
Sbjct: 61  GQVFLVEPGELHDGDAPTAGGFTYHMLYLDPHWLAREVSAVFEEAPQGSQ-LSFTSTLTS 119

Query: 116 DPTLFHSLQQLHHLLRQDNLS---QLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLA 172
           DP L  +  Q    L    L    Q A D L  +    L  R  Y + P + PL  H   
Sbjct: 120 DPRLALATSQAFRTLHSGELRIVRQRAMDQLLERLTGQLYWRTRYREDPRL-PLVAHKA- 177

Query: 173 LLKEWVLSQLDQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQS 232
             +E++ + L   + +++LA  C +   +  R FK+  GL P+A+L +LRL +A  LL  
Sbjct: 178 --REYLHAHLQVDVGMDELALACGVDRFRLTRAFKSAFGLPPHAYLVQLRLARARHLLAR 235

Query: 233 GKPGTDVAYQVGFYDQAHFSKAFKATYGLSPS 264
           G+   +VA  +GF DQ+H  + F   YGL+P+
Sbjct: 236 GEQPAEVAIALGFADQSHLGRWFVRAYGLTPA 267