Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score =  121 bits (304), Expect = 1e-32
 Identities = 82/267 (30%), Positives = 126/267 (47%), Gaps = 23/267 (8%)

Query: 5   DTVNYRPSAY-PAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGV 63
           D+  +R  A  P + L  A    +AFE H H    IG I  G +RF ++G  H   +  V
Sbjct: 13  DSARFRHLAQLPGLELYHAHISDYAFEPHTHEAFGIGTIETGAERFRYRGTQHLAAEKSV 72

Query: 64  VLMSPDELHDGHAHSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIVQDPTLFHSL 123
           V M+PDE+H G + +  G++ ++  IEP+ L         E+V G       D T    L
Sbjct: 73  VTMNPDEIHTGESATEGGWRYRMVYIEPDLL---------EEVTGLRHWWFSDVTRHDPL 123

Query: 124 --QQLHHLL-----RQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKE 176
             QQ+  L+       D L+Q        + F PL      +++      G H    ++E
Sbjct: 124 RSQQIGRLIYGLWHTDDPLAQKGLLLDLIETFRPLAHHAPVIQE------GAHRFERVRE 177

Query: 177 WVLSQLDQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPG 236
           ++     + + L++LA +  LSP  FQR FKA   +TP+  L  +RL +A   L  G P 
Sbjct: 178 YLHDNYMRALTLDELASVVSLSPYHFQRQFKAHFHVTPHQMLMAIRLWRAKAFLTHGMPA 237

Query: 237 TDVAYQVGFYDQAHFSKAFKATYGLSP 263
            +VA   G  DQ+H ++AF   YG++P
Sbjct: 238 AEVAAATGLTDQSHLTRAFTHRYGITP 264