Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score =  106 bits (264), Expect = 6e-28
 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 7/265 (2%)

Query: 5   DTVNYRPSAYPAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVV 64
           D +  R  A   I  I+A +   AF+ H+H    +G+   G Q+F+ +   H+   G   
Sbjct: 4   DWLELRQHADTGIETIKAHFEGHAFDPHWHDSYLVGITLSGTQQFHCRRERHRSQPGDAF 63

Query: 65  LMSPDELHDGHAHSNTGYQVQVFSIEPEWLQQTL----EANQIEQVIGFEQLIVQDPTLF 120
           L+ P E+HDG A    G+    F ++  WL   L    E+      + F Q + ++P L 
Sbjct: 64  LLEPGEIHDGDAPVEGGFTYLTFYLDERWLTHALQGLYESTPGSYSLHFAQTLTREPQLV 123

Query: 121 HSLQQLHHLLRQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLA-LLKEWVL 179
            ++ +    L  D +  + +  +        +  + + ++     L    +A   ++++ 
Sbjct: 124 RAIGETFSTLHNDEMKIVQQSTM--DNLLSRITAHCHWRKKLPSQLQSAAVAHRARDYLY 181

Query: 180 SQLDQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDV 239
           + + + + L  LA+          R FK +  L P+AWL +LRL +A +LL  G    DV
Sbjct: 182 AHIGENVGLSDLARETGTDRFTLTRCFKREFNLAPHAWLIQLRLAKARQLLARGDQPVDV 241

Query: 240 AYQVGFYDQAHFSKAFKATYGLSPS 264
           A  VGF DQ+H  + F+  Y +SP+
Sbjct: 242 AAAVGFADQSHLGRWFQRAYRISPA 266