Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score = 97.1 bits (240), Expect = 4e-25
 Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 26/263 (9%)

Query: 17  ISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHA 76
           I  IEA +    +E H H    IG    GVQ F+++G+      GG +++ PDE+HDG A
Sbjct: 20  IERIEAYFSGHGYEPHRHDTYAIGRTLSGVQSFHYRGSKQHSLPGGTMVLHPDEIHDGEA 79

Query: 77  HSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIVQDPTLFHSLQQL--------HH 128
            +N G+Q ++  I+P ++Q+ L    +  + G    I  DP LF + + L          
Sbjct: 80  GTNDGFQYRMLYIDPAFIQKILGGKPLPFIPGG---ISSDPRLFAATEPLLKAPEESFDT 136

Query: 129 LLRQDNLSQLAKDCLPYQG--FAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQPI 186
           L   D L  LA       G  F   L  Y   ++              +E++ ++    I
Sbjct: 137 LEEDDALYDLAHTLAVVGGQRFRRNLVDYQSAER-------------AREYIHTEFIHNI 183

Query: 187 RLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFY 246
            L+ L+ +         R F+A  G +PY ++   RLE   +L+Q+G    + A    F 
Sbjct: 184 TLDTLSAVSGRDRWSLSRDFRALYGTSPYRYVTMRRLEYCRRLIQAGLSLAEAAAAARFS 243

Query: 247 DQAHFSKAFKATYGLSPSLITRF 269
           DQ+H ++ F  T G+SP    +F
Sbjct: 244 DQSHMTRQFIKTLGMSPGRWQKF 266