Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score =  105 bits (263), Expect = 8e-28
 Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 5/258 (1%)

Query: 9   YRPSAYPAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSP 68
           +R   +  +  + A +    +  H H    IG I  G Q    QG   Q G G + L++P
Sbjct: 12  WRDRRFGGMECLSATFLTHEYSPHAHDTFSIGAIESGSQISTIQGTTEQTGPGHLYLINP 71

Query: 69  DELHDGHAHSNTGYQVQVFSIEPEWLQQTLE---ANQIEQVIGFEQLIVQDPTLFHSLQQ 125
           DE+HDG A    GY+ ++   + E L+  +E         +  F + + +DP +  S Q 
Sbjct: 72  DEVHDG-APGGGGYRYRMIYPDAELLRDIIEDVTGRVFHGMPSFPKFLPRDPQMAASFQM 130

Query: 126 LHHLLRQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQP 185
            H  L +     L  D   +   A L  R+       V+   +  +   ++++    +  
Sbjct: 131 AHRRL-EAKTGALEADEGMFSVLAALFGRHGSAIILAVETREKTAVYNARDYLTDNYETD 189

Query: 186 IRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGF 245
           I LE+LA +  LS     R F+ +  +TP+A+L  +R+ QA +LL++G+   +VA   GF
Sbjct: 190 IGLEELASIAGLSRAHLIRAFRKEFHITPHAYLTDVRIRQARRLLRAGEMPAEVAALCGF 249

Query: 246 YDQAHFSKAFKATYGLSP 263
            DQAHF++ FKA  G++P
Sbjct: 250 ADQAHFTRHFKARTGVTP 267