Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score = 69.7 bits (169), Expect = 6e-17
 Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 26/263 (9%)

Query: 15  PAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDG 74
           P ++ + AD  + +F RH H    IGLI +G Q+        + G G V+ ++P E+HDG
Sbjct: 14  PGVAAVVADSDR-SFPRHMHDQFGIGLIARGAQKSLSGRGMVEAGAGHVITVNPGEVHDG 72

Query: 75  HAHSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIVQDP--------TLFHSLQQL 126
                 G   ++  ++ E ++  +     +    FE     D          +F ++   
Sbjct: 73  IPLGEGGRAWRMLYLDIEIVRDAIADISEKDRGTFEFAYPVDTRPLAKRFNAVFSAVTAK 132

Query: 127 HH----LLRQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQL 182
                 L   + L     D +      P++     +K+              K  +    
Sbjct: 133 ERPGETLDSDETLLMFLADAMETAANPPVVAAPDTIKRA-------------KSSIDDDP 179

Query: 183 DQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQ 242
            +P RL  LA+   +S  +F R F   TGLTP+++L + R+  A   L  G    + A  
Sbjct: 180 ARPFRLADLAKEAGMSQFRFLRAFAKATGLTPHSYLLQRRVHLARHALADGTRPAEAAVI 239

Query: 243 VGFYDQAHFSKAFKATYGLSPSL 265
            GF DQ+H ++ F   +G++P++
Sbjct: 240 AGFVDQSHLNRFFVRQFGVTPAV 262