Pairwise Alignments

Query, 222 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., Threonine efflux protein from Pseudomonas sp. S08-1

 Score =  107 bits (266), Expect = 2e-28
 Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 10/200 (5%)

Query: 7   LATLAGVHFIALLSPGPDVALVVQNATQHGRKTGVMIALGLSCGILVHLILSLSGISYLV 66
           L ++  +  +A++SPG D A+V +N+    R+ G++ ALG+S G+LVH+  S+ GI  L+
Sbjct: 4   LVSVVTITLLAVISPGADFAMVSRNSMFLSRRAGLLTALGISLGVLVHVTYSMLGIGLLI 63

Query: 67  KQQPMLFNLLQLAGGSYLLYLGAGALQS--VMAQKNASTPTHSPAPSILGNRRQAFTKGM 124
            Q  +LFNL++ AG +YL++LG G L+S  V  Q+  + P  S          QA   G 
Sbjct: 64  SQSILLFNLVKFAGAAYLIWLGIGMLRSRKVDPQQVVAAPQLSD--------WQALRIGF 115

Query: 125 MTNLLNPKALVFFVSLLSSLIPASMSVSGKVSAAAILVGLSLTWFSCLAWLLTTSAMQQR 184
           +TN LNPK  +F V+L + +I    +   ++     +    L WF+ +A+ L++ A +  
Sbjct: 116 LTNALNPKTTLFVVALFTQVISPDTASLTQLGYGLFMSAAHLFWFALVAYGLSSEAARGF 175

Query: 185 MQRITRSVDSICAAVFILAG 204
           + R    ++     V +  G
Sbjct: 176 VARSRHLIERAIGGVLVALG 195