Pairwise Alignments

Query, 222 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., neutral amino-acid efflux system (NCBI) from Escherichia coli BW25113

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 8/186 (4%)

Query: 10  LAGVHFIALLSPGPDVALVVQNATQHGRKTGVMIALGLSCGILVHLILSLSGISYLVKQQ 69
           L G  FI L+ PGP+   V++N+   G K G + A G+  G  V + L+ +G++ L+K  
Sbjct: 14  LVGAIFIVLV-PGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFLAWAGVATLIKTT 72

Query: 70  PMLFNLLQLAGGSYLLYLGAGALQSVMAQKNASTPTHSPAPSILGNRRQAFTKGMMTNLL 129
           P+LFN+++  G  YLLYLG+  L + +  KN+   +  P    +      F + ++ +L 
Sbjct: 73  PILFNIVRYLGAFYLLYLGSKILYATLKGKNSEAKSDEPQYGAI------FKRALILSLT 126

Query: 130 NPKALVFFVSLLSSLIPASMSVSGKVSAAAILVGLSLTWFSCLAWLLTTSAMQQRMQRIT 189
           NPKA++F+VS     I  +   +G +S   +   L L  F  L++L+ + A   +  R  
Sbjct: 127 NPKAILFYVSFFVQFIDVNAPHTG-ISFFILAATLELVSFCYLSFLIISGAFVTQYIRTK 185

Query: 190 RSVDSI 195
           + +  +
Sbjct: 186 KKLAKV 191