Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 779 a.a., ATP-dependent helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  131 bits (330), Expect = 1e-34
 Identities = 163/639 (25%), Positives = 267/639 (41%), Gaps = 56/639 (8%)

Query: 11  LNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKAAAE 70
           L  +Q+  V     + L+ A  GSGKT VLV  +  L+     +P +++A+ F   A   
Sbjct: 9   LTAEQKAVVRHTEGHALVEAAPGSGKTTVLVAYLRRLVKTG-GNPNAMLALMFNKSAQLS 67

Query: 71  MRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKRLIK- 129
              R+   + G        T H I +RIL        L  +             +R +K 
Sbjct: 68  FEARLRRAL-GEGPIPDVRTLHSIGNRILAQLVSGGMLPREKLETSGKKADAFARRALKE 126

Query: 130 -----AHNLDDKQWPARQVAWWINNQKDEGLRPTHI---NAFDPVTQTYLKLYTAYQEAC 181
                  +    Q   +  + +I   K +   P  +   + F P  + ++  +    +  
Sbjct: 127 AWARTGGSATPTQAQYQGFSQFITLVKSDLRPPAEVFEESGFAPDCRAFVIAFQLLLQDQ 186

Query: 182 DRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQS 241
           ++  ++ + +++ R +  L  +  +   +  R++ I+VDEFQD NAI +  ++ +AG ++
Sbjct: 187 EKRRVIFYDDLIYRPMVYLDAHPELWSMFANRYERIVVDEFQDINAISFFMVQGLAGTRA 246

Query: 242 NVMIVGDDDQSIYGWRGARVENIEK-FTREFPSVNTIRLEQNYRSTKTILEASNTLIANN 300
           +VM  GD  QSIY +RG+RV  + + F + F       + + +R    I   +N LI   
Sbjct: 247 SVMGCGDPKQSIYAFRGSRVTLMTRHFEQVFQPCTRYPMSRTFRFGHEIAMMANNLI-TL 305

Query: 301 SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS 360
           SE  G  L           V     +  +   VV  +  + E  G L D A+L RN +  
Sbjct: 306 SEEKGLGLVVADNANPKTRVERMPLKAGKDSGVVELLAPY-EHAGRLRDTAMLARNFSHL 364

Query: 361 RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNR-----NDDTAFERVINTPP 415
              E  L +A + Y +YG        EI   +  + L+  R      D   F   + T P
Sbjct: 365 VPYEIELAEAGVPYHVYGREGLLFLPEIAALVCAVSLVAGRWIIEPEDRVHFIFSLLTTP 424

Query: 416 RGLGDKTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDM 475
                 T E +R  A D    L  A    L   +L   AAS  S+     NA   + +D 
Sbjct: 425 SPF--ITYEILREVAEDMEPYLEGAGRREL-PGMLAKIAASIRSK-----NARGAQNLDE 476

Query: 476 PLHVLTDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQE-MTMLTAF 534
            +  L      T          +   +  R+ ++ E    T     PE+A E +  L AF
Sbjct: 477 RVDALRLLVGGTLAQAPAATIVRAYMAHTRMRDVIERAAPT-----PEQAAESLGNLDAF 531

Query: 535 L-----------------THAALEAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEE 577
           +                   AAL+  E  A +H   V L TLH +KGLE+ LV MVG+  
Sbjct: 532 VKLAERAGSIDEFLEVLGPMAALKGDEPPAGDH---VMLTTLHRSKGLEWSLVMMVGLTR 588

Query: 578 GMFPSQMSAEEAGRLEEERRLCYVGMTRAMQKLYITYAE 616
           G+FPS +  ++   ++EERRLC+VG+TRAM +L + + +
Sbjct: 589 GVFPSALPDKD---VDEERRLCFVGITRAMDRLVLFHPD 624