Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., ATP-dependent helicase from Paraburkholderia sabiae LMG 24235

 Score =  164 bits (415), Expect = 1e-44
 Identities = 186/610 (30%), Positives = 271/610 (44%), Gaps = 62/610 (10%)

Query: 7   LLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNK 66
           +LD LN +QRE VA   +N + +A  G+GKT+ +  + A L+  E AS   V AVTF+  
Sbjct: 1   MLDELNPQQRE-VAQLRQNCVAIACPGAGKTKTIAMKAALLLQ-ENAS--MVGAVTFSKD 56

Query: 67  AAAEMRGRIEELM-HGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLK 125
           AA E+R RI  +        +  GTFH + ++ L+     A+ L+   I    D+  LL 
Sbjct: 57  AAIELRERILAVAGKAVKKRLIAGTFHSLAYKQLQRP--GARPLD---IASDGDRLGLLI 111

Query: 126 RLIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFDPVTQTYLKLYTAYQEACDRAG 185
           R+++   LD K   A  V   I   K      T+    D  +    +LY AYQEA  R G
Sbjct: 112 RVMQDLGLDGK---AEDVIPTIEKIK------TNFGQCDSKSADG-QLYHAYQEALARNG 161

Query: 186 LVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQSNVMI 245
            +DF ++L  A+E ++    +       F ++LVDEFQDT+ +QY W+ + A A S V +
Sbjct: 162 KIDFQDMLRLAVEGMQNGTIL----PYPFTYLLVDEFQDTDPLQYRWIELHAKAGSIVTV 217

Query: 246 VGDDDQSIYGWRGA-RVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANNSERM 304
           VGDDDQSIY +R A     +E F +EF     + L  NYR    IL A++ +I NN +R+
Sbjct: 218 VGDDDQSIYAFREALGYRGMESFIKEF-DAKPVVLGSNYRCRSEILAAADRVIRNNVDRI 276

Query: 305 GKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQSRVLE 364
            K L  +   G  +      +E  EA   V  +     +G     CAIL R N     LE
Sbjct: 277 SKVLRAEKGPGGSVLASRHADEYVEATSAVEALAPLLAKG---KSCAILARTNRILDPLE 333

Query: 365 EALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGDKTLE 424
                  + Y    G     R E     + L ++  R  +T  + V+     GL   + E
Sbjct: 334 AVCRSHGVKYYRASGASVLSRPEGALMCNLLEIV-ERVKETGLDAVL--AHMGL---SAE 387

Query: 425 TIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGI-DMPLHVLTDH 483
            +R      G  L       L +  L    A+    F++ +   E  G+ D   + L   
Sbjct: 388 QLRSLHASMGAELIQKPRAELVELGLPEEVATNYREFMKRL--AEWRGLCDRKFYSLVLE 445

Query: 484 AVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAALEAG 543
            V    L             AR E+    + AT           +T LT  L    L   
Sbjct: 446 GVNEWML-----------KYARKESAIRTIQATYDV--------LTRLTGTLADRLLFLR 486

Query: 544 EGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCYVGM 603
           +   +    A+ L T+HS+KGLE+  V++   EE + P   S E      EERRL YV M
Sbjct: 487 QNNNEPTPGALILTTMHSSKGLEWDHVWIARSEESVVPDAKSTE-----PEERRLFYVAM 541

Query: 604 TRAMQKLYIT 613
           TRA + L I+
Sbjct: 542 TRARETLMIS 551