Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 734 a.a., ATP-dependent helicase from Paraburkholderia sabiae LMG 24235

 Score =  251 bits (640), Expect = 1e-70
 Identities = 212/697 (30%), Positives = 332/697 (47%), Gaps = 67/697 (9%)

Query: 11  LNDKQREAV-------AAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTF 63
           LN+ QREAV       A P   LL++AGAGSGKT  L HR+A L+ V+   P  ++ +TF
Sbjct: 35  LNEAQREAVEYGTDDVAKPSGALLVIAGAGSGKTNTLAHRVANLV-VKGTDPRRILLLTF 93

Query: 64  TNKAAAEMRGRIEELMH---GTASGM-----WCGTFHGICHRILRAHYLDAKLLEDFQII 115
           + +AA EM  R+  +     GT + +     W GTFH +  R+LR +     L   F I 
Sbjct: 94  SRRAALEMTRRVTRIASAALGTRAALAQGLTWSGTFHSVGARLLREYADLIGLSPTFTIN 153

Query: 116 DSDDQQRLLKRLIKAHNLD----DKQWPARQVAWWINNQK-DEGLRPTHI-NAFDPVTQT 169
           D +D   L+   +  H L     +K++P++   + I ++  + G     + N+  P  + 
Sbjct: 154 DREDSADLMN--LVRHELGFSAKEKRFPSKSACFAIYSRVVNTGASLADVLNSAFPWCRE 211

Query: 170 Y----LKLYTAYQEACDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDT 225
           +      L+ AY +A  +  ++D+ ++LL    +      I      RF H+LVDE+QDT
Sbjct: 212 WEADLRMLFAAYVDAKQKQSVLDYDDLLLYWSHMA-AEPAIAADLSGRFDHVLVDEYQDT 270

Query: 226 NAIQYAWLRMMAGAQSNVMIVGDDDQSIYGWRGARVENIEKFTREF-PSVNTIRLEQNYR 284
           N +Q + L  +      + +VGDD QSIY +RGA V NI  F   F P    + LE+NYR
Sbjct: 271 NRLQASILLALKPDGRGLTVVGDDAQSIYSFRGATVRNILDFPAHFDPPAKQVTLERNYR 330

Query: 285 STKTILEASNTLIANNSERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQG 344
           ST+ ILEASN +I  ++ER  K LWTD    +   + +  ++ D+AR++V ++   +E G
Sbjct: 331 STQPILEASNAVIDLSTERYTKNLWTDKASAQRPHLVTVADDADQARYIVEQVLAAREAG 390

Query: 345 GTLTDCAILYRNNAQSRVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDD 404
             L   A+L+R    S  LE  L + ++ +  +GG++F +   +KD L+ LR   N  D 
Sbjct: 391 MKLKSQAVLFRAAHHSATLEIELTRRNIPFVKFGGLKFLDSVHVKDVLAVLRWAENPRDR 450

Query: 405 TAFERVINTPPRGLGDKTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVEL 464
            A  RV+   P G+G  T   +      R   L   S  L     ++G AA AL+ F   
Sbjct: 451 VAGFRVVQLLP-GVGPATAARVLDDIAARADALGSGS-ALDVAHGVSGCAAGALAAFAPP 508

Query: 465 INALEEEGIDMPLHV-----LTDHAVKTSGLLEMYQ---QEKGEKSKARIENLEELVTAT 516
              LE+  + + +        T    +   +   Y+   +   E +  R  +L ++ +  
Sbjct: 509 ARTLEDWHLFVAMMASVCGRQTPWPAEFEMVRRWYEPHLERNHEDASIRQADLVQMESIA 568

Query: 517 RQFEKPEEAQEMTMLTAFLTHAALEAGEGQADE------HDDAVQLMTLHSAKGLEFPLV 570
             +   E          FLT   L+  +  +DE       +D + L T+HSAKG E+  V
Sbjct: 569 GTYASRER---------FLTELTLDPPDATSDESGVPLIDEDYLILSTIHSAKGQEWRNV 619

Query: 571 FMVGVEEGMFPSQMSAEEAGRLEEERRLCYVGMTRAMQKLYITYAEMRRLYGQDKYHKPS 630
           F++   +G  PS +       ++EERRL YV MTRA + L+I   +  R Y  ++ H   
Sbjct: 620 FVLNGVDGCIPSDLGTGSEEEIDEERRLLYVAMTRAKEDLHIVMPQ--RFYVHNQTHLGD 677

Query: 631 RFI-----RELPEGCLDEVRMKA-----QVSRPTSTG 657
           R +     R +P   L      A      VS PTS G
Sbjct: 678 RHVWASRTRFIPPHLLPLFDSHAWPPVPVVSAPTSAG 714