Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 745 a.a., ATP-dependent DNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  452 bits (1164), Expect = e-131
 Identities = 274/743 (36%), Positives = 416/743 (55%), Gaps = 41/743 (5%)

Query: 11  LNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKAAAE 70
           LN+ QR AV       +I+AGAGSGKTRVL +RIA L+S +   PF+++A+TFTNKAA E
Sbjct: 7   LNESQRAAVLHTNGPAMIIAGAGSGKTRVLTYRIAHLIS-QGVDPFNILALTFTNKAAKE 65

Query: 71  MRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKRLIKA 130
           MR RIE+++   A  +W GTFH +  RILRA        + F I DSDD + L++ ++K 
Sbjct: 66  MRHRIEKVIGNEAKNIWMGTFHSVFSRILRAEADKIGYPKSFTIYDSDDSKTLIRNIVKE 125

Query: 131 HNLDDKQWPARQVAWWINNQKDEGLR-PTHINAFDPVTQT---------YLKLYTAYQEA 180
            NLDDK +    V   I++ K++ +    +IN  DPV Q            K+Y  YQ  
Sbjct: 126 MNLDDKLYKPNVVLGRISSAKNKLISVKQYIN--DPVIQADDEAAMRPKIGKIYEMYQSR 183

Query: 181 CDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ 240
           C RAG +DF ++L     L + +      YQ  F +++VDE+QDTN  QY   R +A   
Sbjct: 184 CFRAGAMDFDDLLFNTNVLFKDHPDALNKYQHIFHYVMVDEYQDTNYSQYLITRKLAAKN 243

Query: 241 SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN 300
            N+++VGDD QSIY +RGA ++NI  F R++P +   +LEQNYRSTK I+ A+N++I +N
Sbjct: 244 QNIVVVGDDAQSIYAFRGADIQNILNFERDYPELQVFKLEQNYRSTKNIVHAANSVIKHN 303

Query: 301 SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGG---TLTDCAILYRNN 357
             ++ K+++TD   G  I V  A ++ +E + V + I  ++E+     +  D AILYR N
Sbjct: 304 QAQLRKEVFTDNEQGPLIEVIKANSDNEEGKLVATTI--FEEKMSNHLSYDDFAILYRTN 361

Query: 358 AQSRVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRG 417
           AQSR +EEAL + ++ Y+I GG+ F++R+EIKD ++YLRL  N ND+ A  RVIN P RG
Sbjct: 362 AQSRAMEEALRRMNIKYKIIGGLSFYQRKEIKDLIAYLRLTVNPNDEQALRRVINYPKRG 421

Query: 418 LGDKTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPL 477
           +G+ T + +   A +   ++W+        Q L  R  +A+  F  +I        +   
Sbjct: 422 IGETTEQKLFVTANETNHSVWEVVQNA--GQFLGNRVGTAIENFSIMIKDFARIAQNSDA 479

Query: 478 HVLTDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTH 537
             +  H  K SG+++   Q+K  +  AR EN++EL+   +++    E  + + L AFL  
Sbjct: 480 FDVAKHIAKHSGIVDELHQDKTVEGLARYENIQELLNGIKEYVDDPEKDDKS-LDAFLQD 538

Query: 538 AAL-EAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEER 596
            AL    + +AD+  + V LMT+HSAKGLEF  VF+VG+EE +FPSQM       LEEER
Sbjct: 539 IALITDADTKADDDGEFVTLMTIHSAKGLEFKNVFIVGMEENLFPSQMMLNSRADLEEER 598

Query: 597 RLCYVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLD-------------- 642
           RL YV +TRA +KLY+TYA  R  +G  +  + SRF+ E+    ++              
Sbjct: 599 RLFYVAITRAEKKLYLTYATSRYQWGNLRACEKSRFLDEIDPKFINFKYGESNTGGNVFD 658

Query: 643 -----EVRMKAQVSRPTSTGRFSQTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGP 697
                +  +     R      ++     +  + +    G +V HPKFG G +   +  G 
Sbjct: 659 RVLQRKSNLVTPAPRKQVASNYTAPADFKPDDTSTLAAGMKVEHPKFGFGVVTKMDTQGN 718

Query: 698 QSRVQVAFNGEGIKWLVTAYARL 720
            ++  + F+  G K L+ ++A+L
Sbjct: 719 STKAIINFDEVGEKTLLLSFAKL 741