Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 761 a.a., DNA helicase II from Magnetospirillum magneticum AMB-1

 Score =  496 bits (1276), Expect = e-144
 Identities = 292/740 (39%), Positives = 426/740 (57%), Gaps = 45/740 (6%)

Query: 8   LDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKA 67
           L GLN +Q +AV      +L+L+GAG+GKT+VL  R+A +++   A P+  +AVTFTN+A
Sbjct: 33  LQGLNPEQFQAVTTTDGPVLVLSGAGTGKTKVLTSRLAHILASNLAQPWQCLAVTFTNRA 92

Query: 68  AAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKRL 127
           A EM+ R+ +L+   + G+W GTFH +C RILR+H     L  DF ++DSDDQ R+LK++
Sbjct: 93  AREMKERVGQLVGPVSDGIWLGTFHSLCLRILRSHAEAVGLGGDFTVLDSDDQMRVLKQV 152

Query: 128 IKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFDPVTQTYLKLYTAYQEACDRAGLV 187
           +   ++D K  P + +   I   KD  + P    A          LY AYQ+        
Sbjct: 153 MAEAHVDPKGTPPQGLMATIQRWKDRAVTPDKAAADGGAEGQAKTLYRAYQDRLRSLNAC 212

Query: 188 DFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQSNVMIVG 247
           DF ++LL  L +   +      +Q RF+++LVDE+QDTN  QY WLR++A    N+  VG
Sbjct: 213 DFGDLLLHVLTVFLSDAEALARWQGRFRYLLVDEYQDTNVAQYLWLRLLAQTHRNICCVG 272

Query: 248 DDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANNSERMGKQ 307
           DDDQSIY WRGA V NI +F ++FP    +RLE NYRST  IL A++TLIANN  R+GK 
Sbjct: 273 DDDQSIYSWRGAEVGNILRFEKDFPGAKVVRLESNYRSTPHILAAASTLIANNEGRLGKT 332

Query: 308 LWTDGLVGEP-----ISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQSRV 362
           L   G++ EP     I   + ++   EAR V  +I+  Q +G  L+  AIL R   Q+R 
Sbjct: 333 L-RPGIIHEPEAIEKIRTKAVWDGEAEARMVAEEIETLQRRGEKLSSMAILVRAGFQTRE 391

Query: 363 LEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGDKT 422
            EE L+   + YR+ GG RF+ER EI+DA++YLRL+ +  D  AFERV+NTP RGLG+  
Sbjct: 392 FEERLITTGIPYRVIGGPRFYERLEIRDAMAYLRLVVSAADGLAFERVVNTPKRGLGEAA 451

Query: 423 LETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVLTD 482
           ++TI   AR     L +A+  L++   L  +A  AL+RF+E ++        MP   L  
Sbjct: 452 VQTIHMVARAEQVPLLEAARRLVDTDELKPKARQALARFIEDVDRWRSLLESMPHPELAA 511

Query: 483 HAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAALEA 542
             +  SG ++M++ +K   +  R+ENL+ELV A  +++          L +FL H AL  
Sbjct: 512 TILDESGYVDMWKADKSADAPGRVENLKELVAALEEYDS---------LASFLEHVAL-V 561

Query: 543 GEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGR--LEEERRLCY 600
            E  +    D+V +MTLH AKGLEF  VF+ G EE +FP   +  E+G   LEEERRL Y
Sbjct: 562 MENDSRADLDSVVIMTLHGAKGLEFDSVFLPGWEEEVFPHSRALAESGTKGLEEERRLAY 621

Query: 601 VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDE-----------VRMKAQ 649
           VG+TRA +++ +++A  RR+Y Q K   PSRF+ ELPE  ++               KA 
Sbjct: 622 VGLTRARKRVLVSFAANRRIYNQWKSQLPSRFVEELPESHVERSGERGLHGGGLAESKAA 681

Query: 650 VSRPT-STGRFSQ----TVVKESFNET-------GFNLGSRVRHPKFGEGTIINFEGSGP 697
            + P  S  RF Q    T    S+ +        GF  G+RV H KFG GT+++ +G   
Sbjct: 682 WNDPAWSRARFGQPRRETAAAPSWGQAKPRESAGGFKPGARVFHDKFGNGTVLSLDG--- 738

Query: 698 QSRVQVAFNGEGIKWLVTAY 717
            +++++AF+  GIK ++ ++
Sbjct: 739 -NKLEIAFDKAGIKKVLDSF 757